FC930082

Overview
NameFC930082
Unique NameFC930082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 69/173 (39.88%), Postives = 93/173 (53.76%), Query Frame = 1
Query:  187 NNDLLGAEHHFSLFKK--KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR----RKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            + DL   E  + L+++    +    S  E  +RF +FKANL       K+D      + +F+D+T  EFR TY G +    R  R  P +           +P   DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLV+LSEQ+LVD    CD EE   C+ G+
Sbjct:   27 DKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVD----CDKEENQGCNGGL 195          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25
Identity = 65/169 (38.46%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            DLL A  +F  F  KFNK Y+S+ E  RRF IF+ NL     + + D +A + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQL+DCD+          D+G +GGL
Sbjct:   20 DLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGL 179          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25
Identity = 68/171 (39.77%), Postives = 92/171 (53.80%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKK--KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR---RKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            DL   E  + L+++    +    S  E  +RF +FKAN+       K+D      + +F+D+T  EFR TY G +    K+           +      +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVD    CD EE   C+ G+
Sbjct:   29 DLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVD----CDKEENQGCNGGL 195          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25
Identity = 63/169 (37.28%), Postives = 93/169 (55.03%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            D+L A ++F  F  KFNK+Y+S+ E  RRF IF+ NL     +   D +A + + +F+DL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   + ++LSEQQL+DCD           D+G  GGL
Sbjct:   20 DVLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGL 179          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25
Identity = 68/161 (42.24%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            F+ FK+K  + Y S  E   R ++F+ NL  A      +P AT GVT FSDLT  EFR  Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +E   FLA   L +LSEQ LV CD           DSG  GGL
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGL 189          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 67/153 (43.79%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  196 LLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP--ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 636
            L  A   +  FK KF + Y   EE   R  +F  NL+      K     + +    + QFSD+T  +F     G ++    P+ A  A    T+  P   + DWR KGAV PVKDQG CGSCW+FSTTG +EG +FL TG+LVSLSEQQLVDC
Sbjct:   13 LAAANPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKG---PRPA--AVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC 160          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 77/191 (40.31%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  133 IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            IR VTD     L   ES     LG   H   F+ F  ++ K+Y S  E  RRF IF  +L       +       G+ +FSD++  EF+ T LG  +        +   +     LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + G +GGL
Sbjct:   33 IRPVTDRAASTL---ESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGL 212          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 62/148 (41.89%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  256 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRL-----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            S  E  +RF +FK N        K+D      + +F+D+T  EFR TY G + K        P+          + +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVD    CD ++   C+ G+
Sbjct:   50 SLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVD----CDTDQNQGCNGGL 193          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 65/161 (40.37%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  226 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            +K    + Y + EE  RR  +++ N+R          +  HG T     F D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LEG  FL TGKL+SLSEQ LVDC H+         + G +GGL
Sbjct:   32 WKSTHRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGL 182          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 68/168 (40.48%), Postives = 90/168 (53.57%), Query Frame = 1
Query:  205 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT-QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPA---DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            A  H+  FKK+  KA+    E   RF  FK N++ A      +P A + V+ +F+DLTP EF + YL      R  KD  +  +   +  P+     DWR+KGAV PVK+QG CGSCW+FS  G +EG    +   LVSLSEQ LV CD         + D G +GGL
Sbjct:   38 ASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKDHKE-DVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGL 195          
The following BLAST results are available for this feature:
BLAST of FC930082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CYSEP_PHAVU2.682e-2539.88Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATV_NPVHC3.503e-2538.46Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CYSEP_VIGMU4.575e-2539.77Vignain OS=Vigna mungo PE=1 SV=1[more]
CATV_NPVCF4.575e-2537.28Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CYSP_TRYCR5.975e-2542.24Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP1_HOMAM1.019e-2443.79Digestive cysteine proteinase 1 OS=Homarus america... [more]
ALEU_HORVU1.019e-2440.31Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSEP_RICCO2.270e-2441.89Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATL1_RAT2.270e-2440.37Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP1_LEIPI3.873e-2440.48Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionC34003F02EF PostHarvC1 Citrus clementina cDNA clone C34003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930082 ID=FC930082; Name=FC930082; organism=Citrus clementina; type=EST; length=698bp
GAACGAACGCTTCTATTGATATCAGCATTGTCTAAAAACATGGGATCTAA
AACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCAT
CAGGGACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGAC
GGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTT
GGGCGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGT
ACGCTTCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAAC
TTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGG
CGTCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACC
TTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCG
ATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGG
CGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTT
TCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAG
CTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGA
TCCTGAGGAACCAGGTTCTTGTGATTCTGGGATGCATGGTGGGCTTAT
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