FC930082

Overview
NameFC930082
Unique NameFC930082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 63/165 (38.18%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  214 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + G +GGL
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGL 182          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 63/165 (38.18%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  214 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + G +GGL
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGL 182          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 645
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+ +F+DL+  E+     G   R  R       +    T+D   LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE 202          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 59/147 (40.14%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  208 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 636
            +HH+ L+KK + K Y  + E   R  I++ NL+             H    G+    D+T  E       LR   + P++       P   LP   DWREKG V  VK QG+CGSCW+FS  GALE    L TGKLVSLS Q LVDC
Sbjct:   25 DHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSD-PNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC 170          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  214 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 636
            HF  + K+  K Y+S E ++ R  +F  N R+     + + +    + QFSD++ AE +  +L        P++        +  T   P+  DWR+KG  V PVK+QG+C SCW+FSTTGALE A  +A+GK++SL+EQQLVDC
Sbjct:   32 HFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDC 170          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 61/153 (39.87%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  208 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 645
            +HH++L+KK ++K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  E
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE 173          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 62/158 (39.24%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  226 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            +K    + Y   EE  RR  +++ N++      +      HG +     F D+T  EFR+   G + +K +  K   ++ +L   ++P   DWREKG V  VK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G+
Sbjct:   32 WKATHGRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGGL 182          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  205 AEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQK------------LDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            +E +F  F +++NK+Y   +E+  R+ +FK NL +   + +            L  SA  GV +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D G +GGL
Sbjct:   53 SEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGL 222          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 70/179 (39.11%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            D++  E H   FK +  K Y  + E   R  IF  N  + A+  +       S    V +++DL   EFR+   G    L ++LR   ++ +    I P +  LP   DWR KGAV  VKDQG CGSCW+FS+TGALEG +F  +G LVSLSEQ LVDC  +         ++G +GGL
Sbjct:   53 DVVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGL 222          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  226 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 681
            +K    + Y + EE  RR  +++ N++             HG T     F D+T  EFR+     R +K R  K   +   L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+    C+ G
Sbjct:   32 WKATHRRLYGANEEGWRR-AVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQGNQGCNGG 181          
The following BLAST results are available for this feature:
BLAST of FC930082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CATL2_BOVIN1.799e-2138.18Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN1.799e-2138.18Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CPR4_ARATH2.350e-2142.18Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATS_BOVIN2.350e-2140.14Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATH_MOUSE3.069e-2139.31Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATS_CANFA4.008e-2139.87Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_PIG4.008e-2139.24Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATV_NPVHZ5.234e-2134.64Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATL_DROME5.234e-2139.11Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL2_HUMAN8.928e-2141.40Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34003F02EF PostHarvC1 Citrus clementina cDNA clone C34003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930082 ID=FC930082; Name=FC930082; organism=Citrus clementina; type=EST; length=698bp
GAACGAACGCTTCTATTGATATCAGCATTGTCTAAAAACATGGGATCTAA
AACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCAT
CAGGGACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGAC
GGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTT
GGGCGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGT
ACGCTTCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAAC
TTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGG
CGTCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACC
TTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCG
ATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGG
CGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTT
TCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAG
CTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGA
TCCTGAGGAACCAGGTTCTTGTGATTCTGGGATGCATGGTGGGCTTAT
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