FC930117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D1_BOVIN (V-type proton ATPase subunit d 1 OS=Bos taurus GN=ATP6V0D1 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.406e-72 Identity = 127/224 (56.70%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 56 FEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTL +R + EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA TINS Sbjct: 4 FPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D_SCHPO (V-type proton ATPase subunit d OS=Schizosaccharomyces pombe GN=vma6 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.609e-68 Identity = 120/223 (53.81%), Postives = 172/223 (77.13%), Query Frame = 2 Query: 59 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 +A++FN + GY+EA+VRGY + LL Y+NL QCE+L+D ++ LS+T+YG +L N+ S L ++ I K T KL+DE+ + QA E LS F++YITY +MIDN++L++TGT+ +D +LLE+CHPLG F+++ L VA N+ ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNTLYKAYLEDFY FC+K+G TA+ M +L FEADRRA+ TINS Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SKLTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFETLPALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFCKKIGACTADTMLPILEFEADRRAITITINS 223
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_XENTR (V-type proton ATPase subunit d 2 OS=Xenopus tropicalis GN=atp6v0d2 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.584e-68 Identity = 117/219 (53.42%), Postives = 162/219 (73.97%), Query Frame = 2 Query: 71 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 FN+ GYLE +VRG++ G+L + DY NL QCETL+D+K+HL +T+YG +L NE L + I ++ KL+ E+ + A EPL+TFL++ITY +MIDN++L++TGTL +R + EL+ KCHPLG F+ + + +AQ EL+ ++VDTPLA +F +C++ D+D+MNIEIMRN LYK+YLE FYKFC+KLGG T EIM +L FEADRRA TINS Sbjct: 8 FNVDSGYLEGLVRGFKGGILRSTDYLNLAQCETLEDLKLHLQSTDYGSFLANETRQLTVSIIDQRLKDKLMAEFHYFRNHAFEPLATFLDFITYSYMIDNIILLITGTLHQRPISELVPKCHPLGSFEQMEAVNIAQTPAELFNAIIVDTPLADFFQDCLSENDMDEMNIEIMRNKLYKSYLEAFYKFCKKLGGTTEEIMCPILEFEADRRAFVITINS 226
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D_NEUCR (V-type proton ATPase subunit d OS=Neurospora crassa GN=vma-6 PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.722e-66 Identity = 119/227 (52.42%), Postives = 164/227 (72.25%), Query Frame = 2 Query: 59 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC----QKLGGATAEIMSDLLAFEADRRAVNTTINS 727 E + FN++ GY+E IVRGYR LLT+ +Y N+ QCE++DD+K+ L YG +L + P T+ + K T KLV E++++ A L+ F++Y+TYG+MIDNV L++TGTL ERD +ELLE+CHPLG F+++ L VA N+ ELY V+++TPLAPYF ++ +DLD++NIEI+RNTLYK YLEDFY F G TAE+MS+LL FEADRRA+N T+NS Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPKPSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRELLERCHPLGWFETMPVLCVATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNTLYKNYLEDFYHFVNTHPDMAGTPTAEVMSELLEFEADRRAINITLNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D_YEAST (V-type proton ATPase subunit d OS=Saccharomyces cerevisiae GN=VMA6 PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.838e-62 Identity = 116/226 (51.33%), Postives = 164/226 (72.57%), Query Frame = 2 Query: 59 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK-CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMRNTLYKAYLEDFYKF-CQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 E + FNI G++E +VRGYR GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S TT+++++ + KL E+ ++ Q++ F++YITYG+MIDNV L++TGT+ +RD E+L++CHPLG FD++ TL+VA ++ LY VLVDTPLAPYF C T+E+LDDMNIEI+RN LYKAYLEDFY F +++ E M LL FEADRR++N +NS Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_MOUSE (V-type proton ATPase subunit d 2 OS=Mus musculus GN=Atp6v0d2 PE=2 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.458e-61 Identity = 109/219 (49.77%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 71 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L NE +PL + I + KL E+ + + EPLSTFL Y+T +MIDN++L++ G L+++ V+E+L KCHPLG F + + +A+ +L++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+YLE FYKFC+ G TA++M +L FEADRRA+ T+NS Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANETNPLTVSKIDTEMRKKLCREFDYFRNHSLEPLSTFLTYMTCSYMIDNIILLMNGALQKKSVKEVLAKCHPLGRFTEMEAVNIAETPSDLFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKSYLEAFYKFCKDHGDVTADVMCPILEFEADRRALIITLNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_RAT (V-type proton ATPase subunit d 2 OS=Rattus norvegicus GN=Atp6v0d2 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.905e-61 Identity = 109/219 (49.77%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 71 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L +E +PL + I + KL E+ + + EPLSTF Y+T +MIDN++L++ G L+++ V+E+L KCHPLG F + + +A++ EL++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+YLE FYKFC+ G TAE+M +L FEADRRA+ T+NS Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLAHETNPLTVSKIDTEMRKKLCREFDYFRNHSLEPLSTFFTYMTCSYMIDNIILLMNGALQKKSVKEVLAKCHPLGRFTEMEAVNIAESASELFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKSYLEAFYKFCKDHGDVTAEVMCPILEFEADRRALIITLNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_HUMAN (V-type proton ATPase subunit d 2 OS=Homo sapiens GN=ATP6V0D2 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.453e-61 Identity = 107/219 (48.86%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 71 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N +PL + I + +L E+++ + EPLSTFL Y+T +MIDNV+L++ G L+++ V+E+L KCHPLG F + + +A+ +L+ +L++TPLAP+F +C++ LD++NIE++RN LYK+YLE FYKFC+ G TAE+M +L FEADRRA T+NS Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVSKIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKSYLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_BOVIN (V-type proton ATPase subunit d 2 OS=Bos taurus GN=ATP6V0D2 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 8.003e-60 Identity = 107/221 (48.42%), Postives = 153/221 (69.23%), Query Frame = 2 Query: 65 MTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 + FN GYLE +VRG +AGLLT DY NL QCE L+D+K+HL T+YG +L N+ +PL + I + KL E+++ + EPLSTF Y+T +MIDNV+L++ G L+ + V+++L KCHPLG F + + +A+ +L+ +LV+TPLAP+F +C + LD++NIEI+RN LYK+Y+E FYKFC+ G TAE+M +L FEADRRA T+NS Sbjct: 7 LNFNADHGYLEGLVRGCKAGLLTRRDYVNLVQCENLEDLKIHLQTTDYGNFLANQATPLTVSVIDTEMRKKLCREFEYFRNHSLEPLSTFFTYMTCSYMIDNVILLMNGALQNKPVKDVLVKCHPLGHFTEMEAVNIAETPSDLFNAILVETPLAPFFQDCTSENALDELNIEILRNKLYKSYIEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNS 227
BLAST of FC930117 vs. ExPASy Swiss-Prot
Match: VA0D2_PONAB (V-type proton ATPase subunit d 2 OS=Pongo abelii GN=ATP6V0D2 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.365e-59 Identity = 105/219 (47.95%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 71 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLRERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNTTINS 727 FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N+ +PL + I + +L E+++ + EPLSTFL Y+T +MIDNV+ ++ G L+++ V+E+L KCHPLG F + + +A+ +L+ +L++TPLAP+F +C++ L+++NIE++RN LYK+YLE FYKFC+ G TAE+M +L FEADRRA T+NS Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANQTNPLTVSKIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVIPLMNGALQKKSVKEILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALNELNIELLRNKLYKSYLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNS 227 The following BLAST results are available for this feature:
BLAST of FC930117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930117 ID=FC930117; Name=FC930117; organism=Citrus clementina; type=EST; length=729bpback to top |