FC930122

Overview
NameFC930122
Unique NameFC930122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 2
Query:   95 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYV 577
            Q++ D +  LPGQ  +VNF  Y GYVTVNE +GR+L+Y+FVEA    +S PLVLWLNGGPGCSS+ YG  +E+GPF +  D KTLY NPYSWN VAN+LFL+SP G GFSY+NT++D+   GD +TA D+  FL+KWLERF ++KGRDFYI+GESY GHYV
Sbjct:   74 QKERDLIENLPGQP-SVNFKQYGGYVTVNESAGRSLYYYFVEATNTKNSSPLVLWLNGGPGCSSL-YGAFQELGPFRVHSDNKTLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAGHYV 232          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.158e-56
Identity = 101/185 (54.59%), Postives = 135/185 (72.97%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGN 661
            D + +LPGQ  +V F  Y GYV VN+ +GR L+Y+FVE ++  ++ PLV+W NGGPGCSS+  G  +E+GPF +  DGKTL+ NPYSWN  AN+LFL++PVG GFSYSN+  +    GDK TAED+  FL+ WLERF ++KGRD YI+G+SY GHYVPQL++ I+  N  T    INL+G ++GN
Sbjct:   62 DLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLG-GAFKELGPFRVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPIN-GKQGDKATAEDNYMFLVNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIILHRNNQT---LINLRGILIGN 241          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.158e-56
Identity = 104/201 (51.74%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   98 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKA--INLKGYMVGNAXTDDYHDYLG 694
            ++ D V  LPGQ  +V+F HY+GYV V++ +GRALFYWF EA++ P  KPLVLWLNGGPGCSS+ YG  +EIGPF    + K L  NPY+WN+  N+LFL+SPVGVGFSYSNTSSD     D    +D+  FL  W E+F + KG +FYI+GESY G YVP+L++ +  +N+   + +  INLKG+++GN    +  D+ G
Sbjct:   40 KEADLVTNLPGQP-DVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELAELVYDNNEKNNDLSLHINLKGFLLGNPDISNPDDWRG 239          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.158e-56
Identity = 105/203 (51.72%), Postives = 143/203 (70.44%), Query Frame = 2
Query:   95 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEA-VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAXTDDYHDYLGLF 700
            QQ+ DR+  LPGQ   V F  Y GYVT+++ +GRAL+YWF EA   DP + PLVLWLNGGPGCSSI  G  +E+GPF +  +G++L LN Y+WN+ ANILF +SP GV FSYSNTSSD++  GD + A+D+  FL+KW ERF  +  R+FYI+GES  GH++PQLS+ + R+        IN +G +V +  T+D+ D +G+F
Sbjct:   59 QQEDDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSM-GDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQLSQVVYRNR--NNSPFINFQGLLVSSGLTNDHEDMIGMF 256          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.728e-55
Identity = 99/200 (49.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAXTDDYHDYLGLFHF 706
            D V +LPGQ  NV F  ++GYV V+ E+GR+LFY++VEAV++PD+KPL LWLNGGPGCSS+  G   E+GPF+   DG+ L LN  SWN+ +N+LF++SP GVG+SYSN SSD    GDK T  D L FLL+W  +F + K RD +++GESY GHY+PQL+  I+ +N  +     N+KG  +GN       D+   + +
Sbjct:   30 DLVARLPGQP-NVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYN-TGDKSTVNDMLVFLLRWFNKFPELKSRDLFLTGESYAGHYIPQLADVILSYNSRSSGFKFNVKGIAIGNPLLKLDRDFAAAYEY 227          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.697e-54
Identity = 105/201 (52.24%), Postives = 139/201 (69.15%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHN-QATGEKAINLKGYMVGNAXTDDYHDYLGLFHF 706
            D V KLPGQ   V F  ++GYV ++ ++GR+LFY+FVEA + P SKPL LWLNGGPGCSSI  G   E+GPF+   D + L  NP SWN+ +N+LF+DSP GVG+SYSNT+SD T  GD+ TA+D L F+L+WLE+F QFK R+ +++GESY GHYVPQL+  I+ +N Q +     NLKG  +GN       D   ++ F
Sbjct:   36 DLVTKLPGQP-EVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYT-TGDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQLADVILEYNAQRSNRFKFNLKGIAIGNPLLKLDRDVPAIYEF 234          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.305e-54
Identity = 100/185 (54.05%), Postives = 133/185 (71.89%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGN 661
            D V +LPGQ   V F  Y+GYV V+ ++GR+LFY++VEAV+ PDSKPL LWLNGGPGCSSI  G   E+GPF+   DG+ L +N  SWN+ +++LF++SP GVG+SYSN SSD    GDK TA D L FLL+W E+F + K RD +++GESY GHY+PQL+ AI+ +N  +     N+KG  +GN
Sbjct:   31 DLVVRLPGQP-TVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYN-TGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLADAILSYNSHSSGFKFNIKGVAIGN 213          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.076e-53
Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 2
Query:   89 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITA---NGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGN 661
            ++ ++ D + KLPGQ   V+F  Y GYV VNE S R L+Y+FVEA++   S PLV+W NGGP CSS+  G   E+GPF +   G+ L+ NPYSWN  AN+LFL+SPV  GFSYS+   D+      GDK TAED+  FL+ WLERF ++KGRD YI+G+SY GHYVPQL++ II  N+ T    +NL+G ++GN
Sbjct:   57 LSPKEKDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLG-GAFLELGPFRVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIIIHRNKKT---LVNLRGILIGN 246          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51
Identity = 98/200 (49.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAXTDDYHDYLGLFHF 706
            D V +LPGQ   V F  Y+GYV ++  +GR+LFY+FVEA + PD+KPL LWLNGGPGCSS+  G   E+GPF+    G+ L +N  SWN+ +N+LF+DSP GVG+SYSN SSD  A GDK  A D L FLL+W ++F + K  D +++GESY GHY+PQL+ AI+ +N  +     N+KG  +GN       D   ++ F
Sbjct:   27 DLVVRLPGQP-KVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNA-GDKSAASDMLVFLLRWFDKFPELKSHDLFLTGESYAGHYIPQLADAILSYNSRSSGFKFNIKGIAIGNPLLKLDRDIPAVYEF 224          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.525e-51
Identity = 101/196 (51.53%), Postives = 131/196 (66.84%), Query Frame = 2
Query:  101 KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAXTDDYHDY 688
            + DR+ +LPGQ   V F  YSGYVT++E+  RALFY+  EA   P SKPLVLWLNGGPGCSS+  G   E GPF  +P G  L  N +SWNQ AN+L+L++PVGVGFSY+N SS      DK TA+D+L FL KW  +F Q+  R  +I+GESY GHYVPQL++ +I++N+       NLKG  +GN   +   D+
Sbjct:   30 RADRITRLPGQP-RVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF--RPKGSILVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQKWFLKFPQYLNRSLFITGESYAGHYVPQLAQLMIQYNKK--HNLFNLKGIAIGNPVMEFATDF 220          
The following BLAST results are available for this feature:
BLAST of FC930122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCP53_ARATH1.773e-5662.73Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
SCP36_ARATH5.158e-5654.59Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP30_ARATH5.158e-5651.74Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
HNLS_SORBI5.158e-5651.72P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP43_ARATH9.728e-5549.50Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP44_ARATH3.697e-5452.24Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP42_ARATH6.305e-5454.05Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP37_ARATH1.076e-5352.06Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP41_ARATH1.717e-5149.00Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP46_ARATH6.525e-5151.53Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC34004A06EF PostHarvC1 Citrus clementina cDNA clone C34004A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930122 ID=FC930122; Name=FC930122; organism=Citrus clementina; type=EST; length=712bp
TTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTGTTCATTTTCA
TAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCAA
AAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCAATGTCAACTT
TGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCTC
TCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCTT
GTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGGGA
GGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTAT
ACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGAT
TCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTTACTAA
AGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACATCTCC
GGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCAATCAT
AAGGCACAACCAAGCAACTGGGGAAAAAGCAATTAATCTGAAGGGCTACA
TGGTGGGAAATGCTCNTACTGATGATTACCATGATTACTTGGGCCTTTTC
CATTTTGGTGGT
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