FC930122

Overview
NameFC930122
Unique NameFC930122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21
Identity = 60/175 (34.29%), Postives = 80/175 (45.71%), Query Frame = 2
Query:  203 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS------------------------------------YSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 613
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  + PD  +  LNP+SWN   N+L+LD PV VG S                                    Y++ + D TA G +  A     F   W + F  +  RD  IS   ESYGG Y P  +      NQ
Sbjct:   85 FFWFFEARKDPENAPLSIWMNGGPGSSSM-FGMMTENGPCFVNPDSNSTRLNPHSWNNEVNMLYLDQPVQVGLSYDTLANFTRNLVTDEITKLEPGDPIPEQNATFLVGTYASRNMDTTAKGTRNAAIALWHFAQVWFQEFPGYHPRDSRISIATESYGGRYGPAFTAFFEEQNQ 258          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19
Identity = 63/197 (31.98%), Postives = 84/197 (42.64%), Query Frame = 2
Query:  176 VNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS-------NTSSD-----------------------------ITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 652
            VN+      F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D  +   NPYSWN   N+L++D P  VGFSY        N  +D                              TAN  +  A     F   W + F ++K  +  +S   ESYGG Y P  +      N+      I  +G M
Sbjct:   74 VNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAFTSYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 63/171 (36.84%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  167 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 664
            YVTV E++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT +D  A      A D +  L  + +   +F+   FYI  ESYGG     +S  + +  Q  G    N  G  +G++
Sbjct:   42 YVTVREDA--RMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNT-TDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISLELHKAIQ-QGTIKCNFSGVALGDS 201          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18
Identity = 55/175 (31.43%), Postives = 80/175 (45.71%), Query Frame = 2
Query:  203 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS------------------------------------YSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRD--FYISGESYGGHYVPQLSKAIIRHNQ 613
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  +  D  +  LNP+SWN   N+L++D PV VG S                                    Y++ + + TA+G +  A     F   W + F  +  R+    I+ ESYGG Y P  +      NQ
Sbjct:   85 FFWFFEARKDPENAPLGIWMNGGPGSSSM-FGMMTENGPCFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSYDTLANFTRNLVTDEITKLKPGEPIPEQNATFLVGTYASRNMNTTAHGTRHAAMALWHFAQVWFQEFPGYHPRNNKISIATESYGGRYGPAFTAFFEEQNQ 258          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCP54_ARATH (Putative serine carboxypeptidase-like 54 OS=Arabidopsis thaliana GN=SCPL54 PE=5 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 51/166 (30.72%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  146 NFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLK 643
            +   ++GY ++       LF++F ++  +  S P+V+WL+GGPGCSS                     Y+   S+ +++N++++D P+  GFSY+N S+D+  + D   + D   FL  + +        DFYI+GESY GHY+P L+  +   N+      INLK
Sbjct:   31 DLGQHAGYFSLPRSKSARLFHFFFQS-RNNSSDPVVIWLSGGPGCSS-----------------SNQRYI---SYLKISNLIYVDQPIRTGFSYANDSTDLRHDEDS-VSNDLYDFLQAFFKEHPNLAKDDFYITGESYAGHYIPALASRVHNGNEKKEGIVINLK 174          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.916e-18
Identity = 62/171 (36.26%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  167 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 664
            YVTV +++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT +D  A      A D +  L  + +   +F+   FYI  ESYGG     +S  + +  Q  G    N  G  +G++
Sbjct:   42 YVTVRKDAH--MFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNT-TDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISVELYKAVQ-QGTIKCNFSGVALGDS 201          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 2
Query:  107 DRVGKLPGQNFNVNFAH-YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAXTDDY 679
            DR+  LP   F  +    YSGY+  N  S ++LFY +  AV D  S+  ++WL GGPGC+    G   E GP  I     +  LNP SW   AN+L+LD P G G+S    +   T    +  + D +  L  + ++F     +  Y+ GESYG  +    ++A++          IN  G  + +  T DY
Sbjct:   59 DRIKSLP--EFKGSLPELYSGYLEAN--SDKSLFYTYAPAVVD--SETFIVWLQGGPGCAG-TLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTI---EEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLN----INFMGVGIVSGLTADY 236          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 61/188 (32.45%), Postives = 79/188 (42.02%), Query Frame = 2
Query:  203 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 652
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   TAN     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 61/188 (32.45%), Postives = 79/188 (42.02%), Query Frame = 2
Query:  203 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 652
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   TAN     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC930122 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 60/188 (31.91%), Postives = 79/188 (42.02%), Query Frame = 2
Query:  203 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITANGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 652
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   TAN     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSYDVPTNITYSTINDTISVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
The following BLAST results are available for this feature:
BLAST of FC930122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCPB_NANOT5.388e-2134.29Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]
SPCA_NANOT1.733e-1931.98Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
RISC_RAT8.601e-1936.84Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
SCPB_TRIRU1.123e-1831.43Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]
SCP54_ARATH1.467e-1830.72Putative serine carboxypeptidase-like 54 OS=Arabid... [more]
RISC_MOUSE1.916e-1836.26Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
SXA2_SCHPO2.503e-1831.77Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SPCA_TRIEQ5.575e-1832.45Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO5.575e-1832.45Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SPCA_TRIRU7.281e-1831.91Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]

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Properties
Property NameValue
Genbank descriptionC34004A06EF PostHarvC1 Citrus clementina cDNA clone C34004A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930122 ID=FC930122; Name=FC930122; organism=Citrus clementina; type=EST; length=712bp
TTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTGTTCATTTTCA
TAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCAA
AAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCAATGTCAACTT
TGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCTC
TCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCTT
GTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGGGA
GGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTAT
ACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGAT
TCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTTACTAA
AGTGGTTAGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACATCTCC
GGGGAGAGTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCAATCAT
AAGGCACAACCAAGCAACTGGGGAAAAAGCAATTAATCTGAAGGGCTACA
TGGTGGGAAATGCTCNTACTGATGATTACCATGATTACTTGGGCCTTTTC
CATTTTGGTGGT
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