FC930146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACAN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis GN=rocA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + +LA +S++ +A G +GQ+C+ C R +IHE +Y VL++ V++ K++ + +P GT +GP++ + F+K + I + G+IL GG +S+G F+QPTIV +++ A ++KEE+F PV+ K + F+ A+ I N+ GL+ ++ + + ++I K G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEK--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACAH (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=rocA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + +LA +S++ +A G +GQ+C+ C R +IHE +Y VL++ V++ K++ + +P GT +GP++ + F+K + I + G+IL GG +S+G F+QPTIV +++ A ++KEE+F PV+ K + F+ A+ I N+ GL+ ++ + + ++I K G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEK--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACAC (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + +LA +S++ +A G +GQ+C+ C R +IHE +Y VL++ V++ K++ + +P GT +GP++ + F+K + I + G+IL GG +S+G F+QPTIV +++ A ++KEE+F PV+ K + F+ A+ I N+ GL+ ++ + + ++I K G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEK--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACAA (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis (strain A0248) GN=rocA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + +LA +S++ +A G +GQ+C+ C R +IHE +Y VL++ V++ K++ + +P GT +GP++ + F+K + I + G+IL GG +S+G F+QPTIV +++ A ++KEE+F PV+ K + F+ A+ I N+ GL+ ++ + + ++I K G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVN---DQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEK--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 12 LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 521 LEL G + V +F T GQ C+ RLL+HESI +D+LV K +KI DP E+G LGP+ + K I KS+G IL GGS E +G F++PTI+ +IS + I +EE+F PVL V F + +EA+++ N GL+S++F++ E Sbjct: 259 LELGGKSPIIVFEDVDIDQVVEWTMFGCFWTNGQICSATSRLLVHESIAAEFIDRLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYFIEPTIISDISTSMQIWREEVFGPVLCVKTFSSEDEALELANDTEYGLASAVFSKDLE 431
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: LADH_METMP (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis GN=MMP1487 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 71/234 (30.34%), Postives = 117/234 (50.00%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG---EAVKQEVILGSIHATLDLHN 695 K LEL GNN KLA +S + + AGQ C + ++L+ E + +T +++ K++ +G+PL+K T +GPL +PES E I+ S+GG++LIGG+ + + + P ++ I + K E F P+L ++ + EEAV I N+ GL + +FT + N K + G + +N + FGG + G E +K V S T+ +HN Sbjct: 236 KVTLELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVVETFTKYVIEETKKLILGNPLDKNTDIGPLISPESALRIENLIKQSVSEGGELLIGGN---RQNSLISPAVINIDEENILSKIETFGPILPILTVKDSEEAVNIANNSKYGLQAGLFTNNINNAMKIADE--LEYGGIMINSSPTFRKDNMPFGGVKKSGLGREGIKYTVEEMSETKTVVIHN 464
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACWK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=rocA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 66/215 (30.70%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE--NIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + +LA +S++ +A G +GQ+C+ C R +IHE +Y VL++ V++ K++ +G+P K +GP++ + F+K + I + GKI+ GG +S+G F+QPTIV +++ A ++KEE+F PV+ K + F+ A+ I N+ GL+ ++ + + ++I K G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVGNPDAKDINMGPVN---DQAAFDKVMSYVAIGKEEGKIVSGGEGDDSKGWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVLSNNRDHIEK--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA2_BACHD (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus halodurans GN=rocA2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 62/213 (29.11%), Postives = 115/213 (53.99%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + ++E+ G + LA +S++ +A G +GQ+C+ R +IH+ +Y VL++ V + KQ+ +G+P +GP+ + IE + + G++++GG +S+G F+QPTI ++ P A I++EE+F PV+ K + F+ A++I N+ GL+ ++ T + +I K G + N GA +G FGG ++ G Sbjct: 282 RVIVEMGGKDTVVVDKDADLDLAAQSIVTSAFGFSGQKCSAGSRAVIHQDVYDVVLEKAVALTKQLSVGEPTAPDVYMGPVVDQGAFSKIMSYIE-VGKEEGRLMVGGEGDDSKGFFIQPTIFADVDPHARIMQEEIFGPVVAFSKARDFDHALEIANNTEYGLTGAVITTNRHHIEK--AKRDFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA1_BACHD (1-pyrroline-5-carboxylate dehydrogenase 1 OS=Bacillus halodurans GN=rocA1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 64/213 (30.05%), Postives = 114/213 (53.52%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + ++E+ G + LA S+L +A G +GQ+C+ R +IH+ +Y VL++ V + K + +GDP + +GP+ ++ + IE I + G+++ GG S G F+QPTI+ ++ P A I++EE+F PV+ K F+ A++I N+ GL+ ++ TR+ +I + G + N GA +G FGG ++ G Sbjct: 282 RVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIE-IGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQ--AKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 3 Query: 12 LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 521 LEL G + V +F T GQ C+ RLL+HESI +D+LV K +KI DP E+G LGP+ + K I KS+G IL GGS E +G +++PTIV +IS + I KEE+F PVL V F + +EA+ + N GL++++F+ E Sbjct: 256 LELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLE 428 The following BLAST results are available for this feature:
BLAST of FC930146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930146 ID=FC930146; Name=FC930146; organism=Citrus clementina; type=EST; length=704bpback to top |