FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_HAEIG (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 89/157 (56.69%), Postives = 117/157 (74.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_HAEIE (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 89/157 (56.69%), Postives = 117/157 (74.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGTVKHAAFVINLPELGGEKRL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_HAEI8 (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 89/157 (56.69%), Postives = 117/157 (74.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G + L
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOPS (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR+ L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOPE (Adenine phosphoribosyltransferase OS=Clostridium perfringens GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR+ L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOP1 (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.272e-45
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   IRVI DFPK GI F+DITTL+ D +  RD++D   E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR+ L
Sbjct:    3 LKDKIRVIEDFPKKGISFKDITTLIADGEGLRDSVDQMAEFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SHESH (Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.497e-45
Identity = 83/167 (49.70%), Postives = 119/167 (71.26%), Query Frame = 3
Query:  195 VKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   +  +A I  +I+ IPD+PKPGI+F+D+T+LL D  A++ T+D+ VE+YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G + L
Sbjct:    2 ISMNNDTLAVIKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKVVGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINENDKVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SHEAM (Adenine phosphoribosyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=apt PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.240e-44
Identity = 84/160 (52.50%), Postives = 116/160 (72.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +A I  +I+ IPD+PK GIMF+D+T+LL D  A++  + L VERYKD   + V G E+RGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++AG++ L++DDL+ATGGT+ A ++L+ R+G  V   A VI LP+L G + L
Sbjct:    6 LALIKQSIKTIPDYPKAGIMFRDVTSLLEDHTAYQTAMKLLVERYKDSGFTKVVGTESRGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDTLEIHVDAIKAGDKVLVIDDLLATGGTIEATVKLIRRLGGDVAHAAFVISLPDLGGEKRL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ENTS8 (Adenine phosphoribosyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=apt PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.116e-44
Identity = 82/160 (51.25%), Postives = 121/160 (75.62%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEK 704
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L ++ G E L ++
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDIGGEERLNKQ 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_YERPY (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=apt PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44
Identity = 86/174 (49.43%), Postives = 122/174 (70.11%), Query Frame = 3
Query:  183 ASADVKAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEK 704
            ASA   AQ  ++  I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:    3 ASASKTAQ--QLKYIKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_HAEIG7.272e-4556.69Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIE7.272e-4556.69Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEI87.272e-4556.69Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_CLOPS7.272e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOPE7.272e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOP17.272e-4556.05Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_SHESH9.497e-4549.70Adenine phosphoribosyltransferase OS=Shewanella se... [more]
APT_SHEAM1.240e-4452.50Adenine phosphoribosyltransferase OS=Shewanella am... [more]
APT_ENTS82.116e-4451.25Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_YERPY3.609e-4449.43Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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