FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PSEHT (Adenine phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=apt PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42
Identity = 76/159 (47.80%), Postives = 116/159 (72.96%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            I ++I  I D+PK GIMF+D+TTL+ +  AF+ TID F+  YKD+  + + G E+RGFIFG P++ A+G  F+P+RKP KLP EV+ ++Y LEYG+D +E+HV A+  G++ L+VDDL+ATGGT+ A I+L++++G    + A V+ LPEL G + + +
Sbjct:    9 IKNSITTIADYPKAGIMFRDVTTLMANPDAFKATIDAFIAAYKDQGFTKIIGTESRGFIFGAPLSYALGIPFIPVRKPGKLPREVVRQDYLLEYGEDTLELHVDAIVPGDKVLLVDDLLATGGTIEATIKLVQKLGGEATDAAFVVSLPELGGEKRIAK 167          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_METFK (Adenine phosphoribosyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR---ETLGEKHYLSC 719
            I S IR IPD+PKPGI F+DITTLL D    R  +D  VERY    +  V GIE+RGFI G  +A  +G  FVP+RK  KLPG+V+  +Y+LEYG D +E+H  A+   E  L++DDL+ATGGT  AA  L+E++G HV+ECA +I LP+L G      LG K +  C
Sbjct:    3 IKSLIRTIPDYPKPGIQFRDITTLLKDASGLRQVVDALVERYAGAKVDKVVGIESRGFIVGAAVAYELGVGFVPVRKKGKLPGDVLGHDYALEYGTDRVEIHSDAISPDEHVLLLDDLIATGGTAEAAAILIEKLGGHVLECAFIIGLPDLGGERKLRVLGYKTFSLC 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACTPJ (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=apt PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 84/157 (53.50%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+E L
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACTP7 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 84/157 (53.50%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+E L
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACTP2 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 84/157 (53.50%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+ Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+E L
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACIC5 (Adenine phosphoribosyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=apt PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.378e-42
Identity = 80/155 (51.61%), Postives = 107/155 (69.03%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            + S +R +PDFPKPGI+F DITTLL D + F   ID   E Y  KNI +V GIEARGFIFGP +A  + A FVP+RKP+KLP   +   Y LEYG D +E+H  A++ G+R ++VDDL+ATGGT+ A ++L+ ++G  +   A  +EL  LKGRE
Sbjct:   12 LKSLVRTVPDFPKPGILFYDITTLLKDRQGFAKLIDALAEHYIGKNIDLVLGIEARGFIFGPALAYRLNAGFVPVRKPRKLPARTVRVTYDLEYGSDTLEIHEDAIEPGQRIVLVDDLLATGGTMEATVKLVRQLGGEIAGLAFAVELDFLKGRE 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALG2 (Adenine phosphoribosyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.412e-42
Identity = 82/165 (49.70%), Postives = 120/165 (72.73%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PK GI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEY  D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKLGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYSTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.412e-42
Identity = 82/157 (52.23%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  +I  IPD+PKPG++F+DITTLL +  A++ TIDL VERY+ K I+ + G EARGF+FG P+AL +G  F+P+RK  KLP E +SE Y+LEYG D +EMH  +V+  ++ L++DDL+ATGGT+ A +RL+ R+G  V E A +I L  L G E L
Sbjct:   11 IKDSIETIPDYPKPGVLFRDITTLLDNPLAYQATIDLLVERYQGKGITKIVGTEARGFLFGAPVALRLGVGFIPVRKAGKLPRETLSETYNLEYGTDTLEMHKDSVRENDKVLVIDDLLATGGTVEATVRLIRRLGGEVSEAAFIIGLLGLGGVERL 167          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NITEU (Adenine phosphoribosyltransferase OS=Nitrosomonas europaea GN=apt PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.412e-42
Identity = 86/169 (50.89%), Postives = 113/169 (66.86%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL---GEKHYLSCS 722
            I S IR IP +P  GIMF+DITTLL D    R TID  V+RY+ + I  V GIE+RGFI   P+A A+ A FVP+RK  KLP E I  +Y LEYG D +E+HV A+  G+R L++DDL+ATGGT+ AAI+L++  G  V+EC  VI+LP++ G   L   G + +  CS
Sbjct:    3 IKSRIRTIPHYPHEGIMFRDITTLLKDPAGLRSTIDGIVQRYQTEKIDKVVGIESRGFIIAAPVAYALSAGFVPVRKQGKLPAETIGCDYQLEYGYDKVEIHVDAIDKGDRVLLIDDLIATGGTMEAAIKLVQEAGGEVIECCFVIDLPDIGGSRRLRQQGHRLFSLCS 171          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SOLUE (Adenine phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=apt PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.762e-42
Identity = 88/157 (56.05%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + S IR +PDFPKPGI+F DITTLL D   F   ID   + Y+D  +  V GIEARGFIF P +A A+GA FVP+RKPKKLP E +   Y LEYG D +EMH  A+  G R LIVDDL+ATGGT SAA R+++  G  VV    VIEL  L GR+ L
Sbjct:    4 LKSLIREVPDFPKPGILFYDITTLLKDPSGFHGVIDGLKDHYRDIKVDTVLGIEARGFIFAPALAYALGAGFVPVRKPKKLPAECVRITYDLEYGTDTLEMHKDAIGNGHRVLIVDDLLATGGTASAAARMVQDAGGIVVGLGFVIELTFLAGRQRL 160          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PSEHT2.586e-4247.80Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_METFK3.378e-4250.60Adenine phosphoribosyltransferase OS=Methylobacill... [more]
APT_ACTPJ3.378e-4253.50Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACTP73.378e-4253.50Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACTP23.378e-4253.50Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACIC53.378e-4251.61Adenine phosphoribosyltransferase OS=Acidobacteriu... [more]
APT_SALG24.412e-4249.70Adenine phosphoribosyltransferase OS=Salmonella ga... [more]
APT_PHOLL4.412e-4252.23Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_NITEU4.412e-4250.89Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_SOLUE5.762e-4256.05Adenine phosphoribosyltransferase OS=Solibacter us... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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