FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CUPTR (Adenine phosphoribosyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=apt PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.828e-42
Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3
Query:  189 ADVKAQDPRIAGISS----AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            AD   Q P +  ++      IR +PD+P+PG+MF+DIT LL D K  R  ID+FV RY D  + +VAGI+ARGFI G  +A  +   FVP+RK  KLP + ++EEY LEYG   +E+H  A + G+R L+VDDL+ATGGT+ A  +LLER+G  VVE A +++LPEL G + L
Sbjct:    2 ADSIIQSPDLGDVTGYLRERIRTVPDWPQPGVMFRDITPLLQDPKTLRVLIDVFVHRYMDAQLDLVAGIDARGFILGAIVAYELNLGFVPIRKKGKLPFQTVAEEYELEYGSATVEIHADACKTGDRVLLVDDLIATGGTMMAGRKLLERLGATVVEGAAIVDLPELGGSKLL 174          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PECCP (Adenine phosphoribosyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=apt PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41
Identity = 78/157 (49.68%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++I+ IPD+PKPGI+F+D+T+LL D  A+  +I++   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   ISE Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G + L
Sbjct:   13 IKNSIKSIPDYPKPGILFRDVTSLLEDPVAYAASIEMLANRYRNSGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTISESYELEYGSDTLEIHSDAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRL 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ERWT9 (Adenine phosphoribosyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=apt PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41
Identity = 79/157 (50.32%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + ++I+ IPD+PKPGI+F+D+T+LL D KA+  +I+L VERY+   I+ V G EARGF+FG P+AL +G  FVP+RKP KLP +  +E+Y+LEYG D +E+H  A+Q G+  L+VDDL+ATGGT+ A + L+ R G  V + A +I L +L G   L
Sbjct:   11 LKNSIQSIPDYPKPGILFRDVTSLLEDPKAYALSIELLVERYRHAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRKTFAEDYALEYGTDTLELHCDAIQPGDVVLVVDDLLATGGTIEATVNLIRRAGGSVKDAAFIINLFDLSGEARL 167          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_AGRT5 (Adenine phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=apt PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.284e-41
Identity = 84/157 (53.50%), Postives = 111/157 (70.70%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +S+AIR IPD+PKPGI+F+DITTLL + +AFR  +D  V+ Y    I  +AG+EARGFI G  +A  + A FVP+RK  KLP   +   YSLEYG D MEMHV AVQ GE+ ++VDDL+ATGGT   A++LL ++G  +V    VI+LP+L GR+ L
Sbjct:    8 LSAAIRSIPDYPKPGIIFRDITTLLGNPRAFRRAVDELVQPYAGTKIDKIAGMEARGFILGGAVAHQLSAGFVPIRKKGKLPHTTVRVAYSLEYGVDEMEMHVDAVQPGEKVILVDDLIATGGTAEGAVKLLRQMGAEIVSACFVIDLPDLGGRKKL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SHEDO (Adenine phosphoribosyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=apt PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.676e-41
Identity = 79/160 (49.38%), Postives = 115/160 (71.88%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +A I  +I+ I D+PKPGIMF+D+T+LL D  A++ TI LFVE+Y+    + V G EARGF+FG P+AL +G  FVP+RKP KLP + I++ Y LEYG D +E+HV A++  ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP++ G + L
Sbjct:   10 LALIKQSIKTIADYPKPGIMFRDVTSLLEDASAYQATIALFVEKYQGMGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRKTIAQSYELEYGMDTLEIHVDAIKPEDKVLVVDDLLATGGTIEATVKLIRQLGGQVEHAAFVISLPDIGGEKRL 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NITEC (Adenine phosphoribosyltransferase OS=Nitrosomonas eutropha (strain C91) GN=apt PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.676e-41
Identity = 83/162 (51.23%), Postives = 112/162 (69.14%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I S IR IP +P+ GIMF+DITTLL D    R TID   ERY+ + I  V GIE+RGFIF  P+A A+GA FVP+RK  KLP E IS +Y LEYG D +E+H  A+   +R L++DDL+ATGGT+ AAI+L++ +G  ++EC  VI+LP + G   L ++ +
Sbjct:    3 IKSRIRTIPHYPREGIMFRDITTLLKDPVGLRITIDEIAERYRAEKIDKVVGIESRGFIFAAPVAYALGAGFVPIRKQGKLPAETISCDYQLEYGYDKIEIHADAIDKDDRVLMIDDLIATGGTMEAAIKLVQEMGGKIIECCFVIDLPGVGGSTRLRQQDH 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRAJA (Adenine phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=apt PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.676e-41
Identity = 83/157 (52.87%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + +++R IPD+PKPGIMF+DITTLL D +AFR  +D  V  +    I  VAG+EARGFI G  +A  + A FVP+RK  KLP   +   YSLEYG D MEMHV A+Q GER ++VDDL+ATGGT   A++LL ++G +VV    +I+LPEL G   L
Sbjct:    7 LKASVRTIPDYPKPGIMFRDITTLLADARAFRRAVDELVNPWAGNKIDKVAGMEARGFIIGGAVAHQLSAGFVPIRKKGKLPHTTVRIAYSLEYGIDEMEMHVDAIQPGERVILVDDLIATGGTAEGAVKLLRQIGANVVAACFIIDLPELGGAAKL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CHRSD (Adenine phosphoribosyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=apt PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41
Identity = 80/157 (50.96%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S IR +PD+P+PG+ F+DIT +L ++ AFR  ID FV RY++ N+  +A I+ARGFI G P+A  +G  FVP+RK  KLP + ISE Y+LEYG   +E+H  A + G+R L++DDL+ATGGT+ AA  L++R G  VVE A +I+LPEL G + +
Sbjct:    8 IKSVIRTVPDWPQPGVNFRDITPVLQNSAAFRKLIDSFVHRYQELNLDAIAAIDARGFIIGAPVAYELGCSFVPVRKKGKLPFKTISETYTLEYGASTVELHSDAFREGDRILVMDDLIATGGTMLAAASLIQRSGGQVVETATIIDLPELGGAQKI 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ALISL (Adenine phosphoribosyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=apt PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41
Identity = 81/168 (48.21%), Postives = 115/168 (68.45%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR---ETLGEKHYLSC 719
            I ++I+ +PD+PK GIMF+D+T+L+ D KA++ TI L VE+YK    + + G EARGF+FG P+AL +G  FVP+RKP KLP   I++ Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LPE+ G    E LG   Y  C
Sbjct:    9 IKNSIKSVPDYPKAGIMFRDVTSLMEDPKAYQATIQLLVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGDVQHAAFVINLPEIGGETRLEGLGLNVYSIC 176          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PELLD (Adenine phosphoribosyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=apt PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.859e-41
Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I S IR IPD+PK GIMF+DITTL+ D   FR  ID   +RY +  +   V+ GIEARGFI G  +A A+G  FVP+RKP KLP + +S+EY+LEYG D +E+H+ A++ G R L+VDDL+ATGGT  AA  L+E+VG  V E A ++ LP++ G E +  K Y
Sbjct:    3 IKSRIRAIPDYPKKGIMFRDITTLIKDPVGFRLVIDNLTQRYLENGVDFDVIVGIEARGFIIGSALAYALGKGFVPVRKPGKLPADTVSQEYALEYGTDKIEIHIDALEKGARVLLVDDLLATGGTALAAAPLIEKVGGVVSEMAFIVNLPDIGGEEKILAKGY 166          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CUPTR9.828e-4249.13Adenine phosphoribosyltransferase OS=Cupriavidus t... [more]
APT_PECCP1.284e-4149.68Adenine phosphoribosyltransferase OS=Pectobacteriu... [more]
APT_ERWT91.284e-4150.32Adenine phosphoribosyltransferase OS=Erwinia tasma... [more]
APT_AGRT51.284e-4153.50Adenine phosphoribosyltransferase OS=Agrobacterium... [more]
APT_SHEDO1.676e-4149.38Adenine phosphoribosyltransferase OS=Shewanella de... [more]
APT_NITEC1.676e-4151.23Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_BRAJA1.676e-4152.87Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_CHRSD2.189e-4150.96Adenine phosphoribosyltransferase OS=Chromohalobac... [more]
APT_ALISL2.189e-4148.21Adenine phosphoribosyltransferase OS=Aliivibrio sa... [more]
APT_PELLD2.859e-4151.83Adenine phosphoribosyltransferase OS=Pelodictyon l... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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