FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACIBL (Adenine phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=apt PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.370e-41
Identity = 80/157 (50.96%), Postives = 109/157 (69.43%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + +R IPD+PKPGI+F DITTL+ +      TID   E + +KNI +V G+EARGFIFGP +A  + A F+P+RKP+KLPGE +   Y LEYG+D +E+H  A+Q  +R L+VDDL+ATGGT  AA  L++++G  +   A VIEL  L GRE L
Sbjct:   13 LKAYVREIPDYPKPGILFYDITTLIKEPVGLARTIDGITEHFLNKNIDLVVGMEARGFIFGPAVAYRLNAGFIPIRKPRKLPGETVKHTYKLEYGEDTLEIHKDAIQKAQRVLVVDDLLATGGTAVAATELVKQLGGEICGIAFVIELDFLNGRERL 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ALKMQ (Adenine phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=apt PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.320e-41
Identity = 86/157 (54.78%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + S IRVI DFPK GI F+DITTLL D +AFR  +D   ++  D +I +V G EARGF+ G P+A  IGA FVP+RKP KLPGE IS EY LEYG D +E+H  A+Q G+R  I+DDL+ATGGT+ A  +L+E +G  VV    +IEL  L G E L
Sbjct:    3 LDSKIRVIEDFPKKGISFKDITTLLKDKEAFRSMVDQLSDQLIDLDIDIVVGPEARGFLVGAPVAYKIGAGFVPIRKPGKLPGETISYEYELEYGTDSLEIHTDAIQPGQRVAILDDLLATGGTVVATAKLIEELGGEVVSINFLIELGFLNGGEVL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SILST (Adenine phosphoribosyltransferase OS=Silicibacter sp. (strain TM1040) GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   IR I DFP  GIMF+D+TTL  D + FR  +D  +  Y  + I  V G+EARGFI G  IA  +G  FVP+RK  KLPG  IS+EY LEYG+ V+E+H  A+Q GE+ L+VDDL+ATGGT  A I+L+E++G  ++ C+ +I+LPEL GR+ L
Sbjct:    7 VKDYIRTIVDFPHEGIMFRDVTTLFADPRGFRMAVDQMLHPYAGQRIDKVVGLEARGFILGGAIAHQLGTGFVPVRKKGKLPGATISQEYKLEYGEAVVELHKDAIQPGEKILVVDDLLATGGTAGAGIKLIEKLGGEIISCSFIIDLPELGGRKHL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_RHIL3 (Adenine phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 85/162 (52.47%), Postives = 112/162 (69.14%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            I+ ++++IR IPD+PKPGI+F+DITTLL + +AFR  +D  V+ Y    I  +AG+EARGFI G  +A  + + FVP+RK  KLP E +   YSLEYG D MEMH  AVQ GE+ ++VDDL+ATGGT   A RLL ++G  VV    VI+LP+L GR  L E
Sbjct:    5 ISELAASIRSIPDYPKPGIIFRDITTLLGNPRAFRRAVDELVQPYAGTKIDKIAGMEARGFILGGAVAHQLSSGFVPIRKKGKLPHETVRIAYSLEYGVDEMEMHRDAVQPGEKVILVDDLIATGGTAVGATRLLRQIGAEVVGACFVIDLPDLGGRRKLEE 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NITWN (Adenine phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 80/157 (50.96%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + +++R IPD+PKPG+MF+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +   Y+LEYG D MEMHV A+  GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L
Sbjct:    7 LQASVRTIPDYPKPGVMFRDITTLLGDARAFRRAVDQLVHPWAGSKIDKVAGIEARGFILGGAVAHQVSAGFVPIRKKGKLPHQTVRMAYALEYGTDEMEMHVDAIARGERVILVDDLIATGGTAEGAVKLLRQIGADVVAACFIIDLPDLGGAAKL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BORPA (Adenine phosphoribosyltransferase OS=Bordetella parapertussis GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 80/153 (52.29%), Postives = 110/153 (71.90%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 683
            +   IR +PD+P PG+ F+DIT +L D + FR  IDLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++EEYSLEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LP L G
Sbjct:   18 VRRTIRSVPDWPTPGVTFRDITPVLQDPRTFRVLIDLFVYRYMRQRLDLVAGVDARGFIVGAVLAHELNLGFVPVRKKGKLPYRTVAEEYSLEYGNAAVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPYLGG 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BORBR (Adenine phosphoribosyltransferase OS=Bordetella bronchiseptica GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 80/153 (52.29%), Postives = 110/153 (71.90%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 683
            +   IR +PD+P PG+ F+DIT +L D + FR  IDLFV RY  + + +VAG++ARGFI G  +A  +   FVP+RK  KLP   ++EEYSLEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LP L G
Sbjct:   18 VRRTIRSVPDWPTPGVTFRDITPVLQDPRTFRVLIDLFVYRYMRQRLDLVAGVDARGFIVGAVLAHELNLGFVPVRKKGKLPYRTVAEEYSLEYGNAAVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPYLGG 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ANADF (Adenine phosphoribosyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=apt PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 83/161 (51.55%), Postives = 113/161 (70.19%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKH 707
            + + IR +PDFP+ GI+F+DIT +L D   FR+ ID FV R+KD+ IS V GIE+RGF+F  P+A A+GA     RKP KLP E I E YSLEYG++ +E+H+ AV+AGER L+VDD++ATGGT  A  RL+ R G  +V  + ++EL  L G + LG +H
Sbjct:   10 VRARIRDVPDFPQKGIVFKDITPVLADPTTFREVIDAFVARWKDERISKVVGIESRGFLFAAPLAYALGAGLTIARKPGKLPWETIREVYSLEYGENSLELHIDAVKAGERVLVVDDVLATGGTADAVGRLVTRQGATLVAYSFLVELGFLGGAKRLGREH 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PROVI (Adenine phosphoribosyltransferase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=apt PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 84/164 (51.22%), Postives = 111/164 (67.68%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I S IR IPD+PK GIMF+DITTL+ D   FR  ID   +RY +  +   VV G+EARGFI G  +A  +G  FVP+RKP KLP +V+S+EY LEYG D +E+H+ A+  G R L+VDDL+ATGGT  AA  L+E+VG  V E A ++ LP++ G   + +K Y
Sbjct:    3 IKSRIRAIPDYPKKGIMFRDITTLIKDPVGFRLVIDGLTQRYLENGVDFDVVVGVEARGFILGSALAYTLGKGFVPVRKPGKLPADVVSQEYELEYGTDKVEIHLDAILPGTRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDIGGERKILDKGY 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PELPB (Adenine phosphoribosyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=apt PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 83/164 (50.61%), Postives = 113/164 (68.90%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I S IR IPD+PK GI+F+DITTL+ D   FR  ID   + Y  + +   V+ GIEARGFI G  ++ A+G  F+P+RKP KLP +V+S+EY LEYG D +E+HV A+ AG++ L+VDDL+ATGGT  AA  L+E+VG  V E A ++ LP++ G   + EK Y
Sbjct:    3 IKSRIRSIPDYPKKGILFRDITTLIKDPVGFRLVIDSLTQHYLQEGMDFDVIVGIEARGFIIGGALSYALGKGFIPVRKPGKLPADVVSQEYQLEYGSDTIEIHVDALVAGQKVLLVDDLLATGGTALAAAALVEKVGGIVAEMAFIVNLPDIGGERKILEKGY 166          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ACIBL6.370e-4150.96Adenine phosphoribosyltransferase OS=Acidobacteria... [more]
APT_ALKMQ8.320e-4154.78Adenine phosphoribosyltransferase OS=Alkaliphilus ... [more]
APT_SILST1.087e-4050.96Adenine phosphoribosyltransferase OS=Silicibacter ... [more]
APT_RHIL31.087e-4052.47Adenine phosphoribosyltransferase OS=Rhizobium leg... [more]
APT_NITWN1.087e-4050.96Adenine phosphoribosyltransferase OS=Nitrobacter w... [more]
APT_BORPA1.087e-4052.29Adenine phosphoribosyltransferase OS=Bordetella pa... [more]
APT_BORBR1.087e-4052.29Adenine phosphoribosyltransferase OS=Bordetella br... [more]
APT_ANADF1.087e-4051.55Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_PROVI1.419e-4051.22Adenine phosphoribosyltransferase OS=Prosthecochlo... [more]
APT_PELPB1.419e-4050.61Adenine phosphoribosyltransferase OS=Pelodictyon p... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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