FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NITHX (Adenine phosphoribosyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=apt PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 80/157 (50.96%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + +++R IPD+PKPG+MF+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +   Y+LEYG D MEMHV A+  GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L
Sbjct:    7 LQASVRTIPDYPKPGVMFRDITTLLGDARAFRRAVDQLVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHQTVRMAYALEYGTDEMEMHVDAIAKGERVILVDDLIATGGTAEGAVKLLRQIGADVVAACFIIDLPDLGGAAKL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_METRJ (Adenine phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=apt PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 82/161 (50.93%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  213 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            R   +  ++R IPD+PKPGI+F+DITTLL D +AFR  +D  V  Y    I  VAGIEARGFI G  IA  +   FVP+RK  KLP + +S  Y+LEYG D +E+HV AV+ G++ L+VDDL+ATGGT  AA+ LL+++G  +V    VI+LPE+ G + L
Sbjct:    5 RHVALKESVRSIPDYPKPGIIFRDITTLLSDPRAFRRAVDALVHPYAGGQIHQVAGIEARGFILGGAIAHQLSCGFVPIRKKGKLPHKTVSMAYALEYGTDEIEIHVDAVRPGDKVLLVDDLIATGGTAIAAVNLLQKIGAEIVAACFVIDLPEIGGAQRL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_OCHA4 (Adenine phosphoribosyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 82/159 (51.57%), Postives = 109/159 (68.55%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            A +  AIR IPD+PKPG+ F+D+TTL+ D +AFR ++D  V  Y    +  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    7 ASLKDAIRTIPDYPKPGVQFRDVTTLMGDAQAFRRSVDELVYPYAGNKVDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGIDEMEMHRDAIEKGERIILVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CHLL2 (Adenine phosphoribosyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 82/164 (50.00%), Postives = 113/164 (68.90%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNIS--VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I S IR IPD+PK GIMF+DITTL+ D   FR  ID   +RY +  +   ++ GIEARGFI G  ++  +G  FVP+RKP KLP +V+S+EY LEYG D +E+H+ A++ G R L+VDDL+ATGGT  AA  L+E+VG  V E A ++ LP++ G + + +K Y
Sbjct:    3 IKSRIRSIPDYPKKGIMFRDITTLIKDPVGFRLVIDSLTQRYLENGVDFDMIVGIEARGFIIGGALSYTLGKGFVPVRKPGKLPADVVSQEYELEYGSDKIEIHMDALEKGTRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDVGGEQKIRDKGY 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BURCH (Adenine phosphoribosyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            DP +A I S IR +PD+P+PG+ F+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LL+R+G  VVE A +I+LP+L G   L
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVQFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACKPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAIIDLPDLGGSTLL 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BURCC (Adenine phosphoribosyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            DP +A I S IR +PD+P+PG+ F+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LL+R+G  VVE A +I+LP+L G   L
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVQFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACKPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAIIDLPDLGGSTLL 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BURCA (Adenine phosphoribosyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            DP +A I S IR +PD+P+PG+ F+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LL+R+G  VVE A +I+LP+L G   L
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVQFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACKPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAIIDLPDLGGSTLL 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACAM1 (Adenine phosphoribosyltransferase OS=Acaryochloris marina (strain MBIC 11017) GN=apt PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.853e-40
Identity = 84/161 (52.17%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKH 707
            + S IR IPDFPKPGI+F+DITTLL +    R  ID F E Y++++I  V GIE+RGFIFG P+A  +GA FVP+RKP KLP  + ++EY LEYG D +E+H  A  AG R L+VDDL+ATGGT +A  +LL  +   +V    +IEL  L GR+ L + H
Sbjct:    3 LKSLIRDIPDFPKPGILFRDITTLLQNPDGLRYVIDQFTEDYREQSIDYVVGIESRGFIFGAPLAYQLGAGFVPVRKPGKLPAAIHAQEYELEYGTDRLEIHQDACPAGSRVLVVDDLLATGGTAAATAQLLAPLNCTLVGFGFIIELTGLAGRQKLPDCH 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NITMU (Adenine phosphoribosyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=apt PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.421e-40
Identity = 84/160 (52.50%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEK 704
            I S IR I  +P  GIMF+DITTLL D    R TI     RYK   I  VAGIE+RGFI G P+A  +G  FVP+RK  KLP E    +Y LEYG D +E+HV A+Q G+R L+VDDL+ATGGT  AA  L+  +G  VVEC+ VI+LP++ GR  L ++
Sbjct:    3 IKSRIRTIAHYPHEGIMFRDITTLLKDPVGLRATIQEIASRYKSMKIDKVAGIESRGFIIGAPVAYELGVGFVPVRKKGKLPAETRGRDYQLEYGSDRIEIHVDAIQKGDRVLLVDDLIATGGTAEAAAGLIHEMGGEVVECSFVIDLPDIGGRARLEDQ 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_METPB (Adenine phosphoribosyltransferase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=apt PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.421e-40
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 3
Query:  213 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            R + +  +IR IPD+PKPGI+F+DITTLL D ++FR  +D  V  Y    I  VAGIEARGFI G  +A  + + FVP+RK  KLP + +S  Y+LEYG D +E+HV A++ G+R ++VDDL+ATGGT +AA+ LL ++G  V+    VI+LPE+ G + L
Sbjct:    5 RHSALKDSIRSIPDYPKPGIIFRDITTLLSDPRSFRRAVDSLVHPYAGGRIDQVAGIEARGFILGGAVAHQLSSGFVPIRKKGKLPHKTVSTAYALEYGTDEIEIHVDAIKPGDRVILVDDLIATGGTATAAVNLLRQLGAEVIAACFVIDLPEIGGAQRL 165          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_NITHX1.419e-4050.96Adenine phosphoribosyltransferase OS=Nitrobacter h... [more]
APT_METRJ1.419e-4050.93Adenine phosphoribosyltransferase OS=Methylobacter... [more]
APT_OCHA41.853e-4051.57Adenine phosphoribosyltransferase OS=Ochrobactrum ... [more]
APT_CHLL21.853e-4050.00Adenine phosphoribosyltransferase OS=Chlorobium li... [more]
APT_BURCH1.853e-4051.53Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_BURCC1.853e-4051.53Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_BURCA1.853e-4051.53Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_ACAM11.853e-4052.17Adenine phosphoribosyltransferase OS=Acaryochloris... [more]
APT_NITMU2.421e-4052.50Adenine phosphoribosyltransferase OS=Nitrosospira ... [more]
APT_METPB2.421e-4049.69Adenine phosphoribosyltransferase OS=Methylobacter... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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