FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_RHIGA (Adenine phosphoribosyltransferase OS=Rhizobium galegae GN=apt PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 81/157 (51.59%), Postives = 111/157 (70.70%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +++AIR IPD+PKPGI+F+DITTLL D  AFR  +D  V+ Y+   +  +AG+EARGFI G  +A  + A FVP+RK  KLP   +S  Y+LEYG D ME+HV AV+ GE+ ++ DDL+ATGGT   A++LL ++G  VV    VI+LP+L GR+ L
Sbjct:    9 LATAIRSIPDYPKPGIIFRDITTLLGDAAAFRLAVDELVKPYEGLGVDKIAGMEARGFILGGAMAHQLSAGFVPIRKKGKLPYRTVSMAYALEYGTDEMEIHVDAVKPGEKVILCDDLIATGGTAVGAVKLLRQIGAEVVSACFVIDLPDLGGRKAL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PARDP (Adenine phosphoribosyltransferase OS=Paracoccus denitrificans (strain Pd 1222) GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR I DFP  GI+F+D+TTL  D + FR  +D  +  Y  ++I  V G+EARGFI G  +A  +   FVP+RK  KLPG VIS+ Y+LEYGK VME+H  A++ GER LIVDDL+ATGGT +A I L  R+G  VV CA VIELPEL GR  L
Sbjct:   19 IRTIVDFPHEGILFRDVTTLFADARGFRMAVDQLLAAYAGEDIDKVVGLEARGFILGGAVAHQLSVGFVPIRKKGKLPGAVISQAYALEYGKAVMEIHDDALKPGERVLIVDDLLATGGTAAAGISLCGRLGAEVVGCAFVIELPELGGRALL 171          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOK5 (Adenine phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 81/153 (52.94%), Postives = 107/153 (69.93%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR++  FPK GI F+DITTL+ D  AF+  +D      KDKNI VV G EARGF+FG PIA  +GA FVP+RK  KLP + +S +Y LEYG DV+++H  A+  G+R  +VDDL+ATGGT S+ ++L+E+ G  +V    VIEL +LKGRE L
Sbjct:    7 IRIVEGFPKKGISFKDITTLIRDKDAFKYAVDKIAGYLKDKNIDVVVGPEARGFLFGAPIAYTLGAGFVPVRKQGKLPYDTLSIKYDLEYGSDVLQIHKDAINKGDRVALVDDLLATGGTTSSVVKLIEQAGGEIVTIDFVIELTDLKGREKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOK1 (Adenine phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 81/153 (52.94%), Postives = 107/153 (69.93%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR++  FPK GI F+DITTL+ D  AF+  +D      KDKNI VV G EARGF+FG PIA  +GA FVP+RK  KLP + +S +Y LEYG DV+++H  A+  G+R  +VDDL+ATGGT S+ ++L+E+ G  +V    VIEL +LKGRE L
Sbjct:    7 IRIVEGFPKKGISFKDITTLIRDKDAFKYAVDKIAGYLKDKNIDVVVGPEARGFLFGAPIAYTLGAGFVPVRKQGKLPYDTLSIKYDLEYGSDVLQIHKDAINKGDRVALVDDLLATGGTTSSVVKLIEQAGGEIVTIDFVIELTDLKGREKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOAB (Adenine phosphoribosyltransferase OS=Clostridium acetobutylicum GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 77/164 (46.95%), Postives = 114/164 (69.51%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            +  +IRVI  FPK GI F+D+TTL+ D +A++ ++D   E  KDKN+ ++   EARGF+FG P+A  IGA F+P+RK  KLP E +   Y LEYG+D++EMH  A++ G+R  IVDDL+ATGGT+++  +L+E +G  VV    V+EL +L G++ LG+   +S
Sbjct:    3 LKDSIRVIDGFPKEGISFKDVTTLIQDKEAYKYSVDKIGEYLKDKNVDLIVAPEARGFLFGAPVAYKIGAGFIPVRKKGKLPCETVEVTYELEYGEDILEMHKDAIKKGQRVAIVDDLLATGGTINSVAKLVEALGGEVVAACFVVELTDLNGKDKLGDYDTMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BURCM (Adenine phosphoribosyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            DP +A I S IR +PD+P+PG+ F+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LL+R+G  VVE A +I+LP+L G   L
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVQFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLLQRLGAVVVEGAAIIDLPDLGGSTLL 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BURA4 (Adenine phosphoribosyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=apt PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            DP +A I S IR +PD+P+PG+ F+DITTLL   KA R  +DLFVERY D  +  VAG++ARGFI  P +A  +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+ATGGT+ A   LL+R+G  VVE A +I+LP+L G   L
Sbjct:   11 DP-VAFIHSQIRTVPDWPQPGVQFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLLQRLGAVVVEGAAIIDLPDLGGSTLL 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SILPO (Adenine phosphoribosyltransferase OS=Silicibacter pomeroyi GN=apt PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.393e-40
Identity = 80/161 (49.69%), Postives = 109/161 (67.70%), Query Frame = 3
Query:  213 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            R   +   IR I DFP  GI+F+D+TTL  D + FR  ID  +  Y  + I  V G+EARGFI G  IA  +   FVP+RK  KLPG  IS++Y LEYG+ ++E+H  A+Q GE+ L+VDDL+ATGGT +A I+L+ER+G  +V CA +I+LP+L GR+ L
Sbjct:    3 RTKSVQDYIRTIVDFPHEGILFRDVTTLFADPRGFRIAIDQMLHPYAGERIDKVVGLEARGFILGGAIAHQLSVGFVPIRKKGKLPGTTISQDYKLEYGEAIVEIHDDAIQPGEKILLVDDLLATGGTAAAGIKLVERLGGEIVSCAFIIDLPDLGGRKVL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_GEOSW (Adenine phosphoribosyltransferase OS=Geobacillus sp. (strain WCH70) GN=apt PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.393e-40
Identity = 81/153 (52.94%), Postives = 109/153 (71.24%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + ++PDFPKPGIMF+DITTL+   + ++   D  VE  ++K I +V G EARGFI G P+A A+G  F P+RK  KLP EV+  EY LEYGKDV+ MH  A++ G+R LI DDL+ATGGT+ A I+L+E++G  V   A +IEL EL+GR+ L
Sbjct:    7 VTIVPDFPKPGIMFKDITTLMDKGEVYKYATDQIVEYAREKKIDIVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVVRVEYGLEYGKDVLTMHKDAIKPGQRVLITDDLLATGGTIRATIQLVEQLGGVVAGIAFLIELTELEGRKKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACTSZ (Adenine phosphoribosyltransferase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=apt PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.393e-40
Identity = 79/157 (50.32%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S+I+ IP++PK GI+F+DIT+L    +AF  T++L  E ++ K I+ + G E+RGFIFG P+A+A+G  F+ +RKP KLP EVIS+ Y LEYG+D +E+H  A+Q G+  L++DDL+ATGGT+ A I+L+ R+G  V   A VI LP+L G E L
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITSLTEIPEAFTATVNLIAEAFRHKGITKIIGTESRGFIFGAPVAVALGLPFILVRKPGKLPREVISQSYQLEYGEDKLEIHADAIQKGDNVLVIDDLLATGGTVEACIKLVNRLGGDVKHAAFVINLPDLGGGERL 164          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_RHIGA4.129e-4051.59Adenine phosphoribosyltransferase OS=Rhizobium gal... [more]
APT_PARDP4.129e-4055.56Adenine phosphoribosyltransferase OS=Paracoccus de... [more]
APT_CLOK54.129e-4052.94Adenine phosphoribosyltransferase OS=Clostridium k... [more]
APT_CLOK14.129e-4052.94Adenine phosphoribosyltransferase OS=Clostridium k... [more]
APT_CLOAB4.129e-4046.95Adenine phosphoribosyltransferase OS=Clostridium a... [more]
APT_BURCM4.129e-4051.53Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_BURA44.129e-4051.53Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_SILPO5.393e-4049.69Adenine phosphoribosyltransferase OS=Silicibacter ... [more]
APT_GEOSW5.393e-4052.94Adenine phosphoribosyltransferase OS=Geobacillus s... [more]
APT_ACTSZ5.393e-4050.32Adenine phosphoribosyltransferase OS=Actinobacillu... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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