FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_TOLAT (Adenine phosphoribosyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S I  IPD+PKPGI+F+D+T+L+   + F  TI+L  E Y+  +   V G EARGFIFG P+A A+   F+P+RKP KLP  V+ + Y LEYG+D ++MH  A++ GE+ L+VDDL+ATGGT+ A I+++   G  V   A VI LP+L G E L
Sbjct:    9 IQSCIATIPDYPKPGIIFRDVTSLVEHPQGFHQTIELLKEHYQSMSFDKVVGTEARGFIFGAPLAYALQLGFIPVRKPGKLPRSVLEQSYQLEYGEDCLQMHCDAIKPGEKVLVVDDLLATGGTVEATIKMIREAGGIVEHAAFVISLPDLGGEERL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ROSCS (Adenine phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            ++  IR +PDFP PGI F+DIT LL    AF+  ID    RY+ +++  V G+E+RGFIF  P+A  +G   VP+RKP KLP E  + EY LEYG + +EMH  A+  G R +++DD++ATGGT++AA +L+E  G  V E AC+IEL  LKGRE L    + S
Sbjct:    5 LTDLIRNVPDFPVPGIQFKDITPLLQHGAAFKQVIDTLAARYEGRSLDAVVGVESRGFIFSAPLAYRLGIGLVPIRKPGKLPWETFAVEYDLEYGSNKLEMHRDALDPGARVVVIDDVLATGGTVAAACQLVETAGAVVEEVACLIELTLLKGRERLANYSFFS 168          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_RHOPS (Adenine phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 78/153 (50.98%), Postives = 109/153 (71.24%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 683
            + +++R IPD+PKPGI+F+DITTLL D +AFR  +D  V+ +    +  VAGIEARGFI G  +A  + + FVP+RK  KLP   +S EY+LEYG D +E+HV AV+ GER ++VDDL+ATGGT   AI+LL ++G  VV    +++LP+L G
Sbjct:    9 LKASVRSIPDYPKPGIVFRDITTLLGDPRAFRRAVDELVQPWAGSKVDKVAGIEARGFIIGGAVAHQVSSGFVPIRKKGKLPHTCVSMEYALEYGTDHIEIHVDAVKPGERVILVDDLIATGGTAEGAIKLLRQLGAEVVAACFIVDLPDLGG 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_MARAV (Adenine phosphoribosyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/169 (47.93%), Postives = 112/169 (66.27%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKH---YLSCS 722
            I  AIR +PD+PKPG+ F+DITT+L D  AFR  ID FV RY  ++I  VA ++ARGFI G  +A  + A  V +RK  KLP + + E+Y LEYG   +E+H  A + G++ ++VDDL+ATGGT+ AA RL+ R+G  +VE A +I+LP+L G   L E+    Y  CS
Sbjct:    8 IKKAIRTVPDWPKPGVSFRDITTVLQDKTAFRKLIDAFVHRYHGQHIDAVAAVDARGFIIGSALAYELNASLVLVRKKGKLPFDTLVEDYELEYGTASVELHEDAFKPGDKVILVDDLIATGGTMLAATRLIRRIGAEIVEVAAMIDLPDLGGSRKLQEEGLQVYTVCS 176          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_EDWI9 (Adenine phosphoribosyltransferase OS=Edwardsiella ictaluri (strain 93-146) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 78/153 (50.98%), Postives = 108/153 (70.59%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I+ IPD+PKPGI+F+D+T+LL    A+  +I+L   RY+   I+ V G EARGF+FG P+ALA+G  FVP+RKP KLP   ++E Y+LEYG D +E+H  A+ A +R L+VDDL+ATGGT+ A  RL+ R+G  V + A +I+LP L G   L
Sbjct:   15 IKTIPDYPKPGILFRDVTSLLEKPDAYALSIELLAARYRAAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLAESYALEYGTDTLEIHQDAIDANDRVLMVDDLLATGGTIEATTRLIRRLGGVVHDAAFIIDLPALGGEARL 167          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRUSU (Adenine phosphoribosyltransferase OS=Brucella suis GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  AIR IPD+PKPG+ F+D+TTL+ + +AFR  +D  V  Y    I  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    9 LKDAIRTIPDYPKPGVQFRDVTTLMGNAQAFRRAVDELVYPYAGNRIDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGVDEMEMHRDAIEKGERVVLVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRUO2 (Adenine phosphoribosyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  AIR IPD+PKPG+ F+D+TTL+ + +AFR  +D  V  Y    I  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    9 LKDAIRTIPDYPKPGVQFRDVTTLMGNAQAFRRAVDELVYPYAGNRIDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGVDEMEMHRDAIEKGERVVLVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRUME (Adenine phosphoribosyltransferase OS=Brucella melitensis GN=apt PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  AIR IPD+PKPG+ F+D+TTL+ + +AFR  +D  V  Y    I  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    9 LKDAIRTIPDYPKPGVQFRDVTTLMGNAQAFRRAVDELVYPYAGNRIDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGVDEMEMHRDAIEKGERVVLVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRUC2 (Adenine phosphoribosyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=apt PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  AIR IPD+PKPG+ F+D+TTL+ + +AFR  +D  V  Y    I  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    9 LKDAIRTIPDYPKPGVQFRDVTTLMGNAQAFRRAVDELVYPYAGNRIDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGVDEMEMHRDAIEKGERVVLVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRUAB (Adenine phosphoribosyltransferase OS=Brucella abortus GN=apt PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  AIR IPD+PKPG+ F+D+TTL+ + +AFR  +D  V  Y    I  VAGIEARGFI G  IA  + A FVP+RK  KLP + +   YSLEYG D MEMH  A++ GER ++VDDL+ATGGT  AA +LL ++G  +V    +I+LP+L GR+ L
Sbjct:    9 LKDAIRTIPDYPKPGVQFRDVTTLMGNAQAFRRAVDELVYPYAGNRIDKVAGIEARGFILGGAIAHQLSAGFVPIRKKGKLPRDTVRIAYSLEYGVDEMEMHRDAIEKGERVVLVDDLIATGGTAEAAAKLLLQMGAEIVAACFIIDLPDLGGRKKL 165          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_TOLAT1.569e-3949.04Adenine phosphoribosyltransferase OS=Tolumonas aue... [more]
APT_ROSCS1.569e-3948.17Adenine phosphoribosyltransferase OS=Roseiflexus c... [more]
APT_RHOPS1.569e-3950.98Adenine phosphoribosyltransferase OS=Rhodopseudomo... [more]
APT_MARAV1.569e-3947.93Adenine phosphoribosyltransferase OS=Marinobacter ... [more]
APT_EDWI91.569e-3950.98Adenine phosphoribosyltransferase OS=Edwardsiella ... [more]
APT_BRUSU1.569e-3951.59Adenine phosphoribosyltransferase OS=Brucella suis... [more]
APT_BRUO21.569e-3951.59Adenine phosphoribosyltransferase OS=Brucella ovis... [more]
APT_BRUME1.569e-3951.59Adenine phosphoribosyltransferase OS=Brucella meli... [more]
APT_BRUC21.569e-3951.59Adenine phosphoribosyltransferase OS=Brucella cani... [more]
APT_BRUAB1.569e-3951.59Adenine phosphoribosyltransferase OS=Brucella abor... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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