FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACC2 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain G9842) GN=apt PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.770e-36
Identity = 76/153 (49.67%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I VV G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDVVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NEIMA (Adenine phosphoribosyltransferase OS=Neisseria meningitidis serogroup A GN=apt PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 71/160 (44.38%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  ++  IR I ++P+ GI+F DIT +L   + FR  +DL V RY D+ I +VAG++ARGFI G  +A  +   FVP+RK  KLP E +S+ Y+LEYG+  +E+H  AV+ G R L+VDDLVATGGT+ A + L+ ++G  +VE A ++E  +L+G + +
Sbjct:   10 VGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEAAVEIHTDAVKLGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NEIM0 (Adenine phosphoribosyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=apt PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 71/160 (44.38%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  ++  IR I ++P+ GI+F DIT +L   + FR  +DL V RY D+ I +VAG++ARGFI G  +A  +   FVP+RK  KLP E +S+ Y+LEYG+  +E+H  AV+ G R L+VDDLVATGGT+ A + L+ ++G  +VE A ++E  +L+G + +
Sbjct:   10 VGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NEIG1 (Adenine phosphoribosyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=apt PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 71/160 (44.38%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  ++  IR I ++P+ GI+F DIT +L   + FR  +DL V RY D+ I +VAG++ARGFI G  +A  +   FVP+RK  KLP E +S+ Y+LEYG+  +E+H  AV+ G R L+VDDLVATGGT+ A + L+ ++G  +VE A ++E  +L+G + +
Sbjct:   10 VGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_MUSSI (Adenine phosphoribosyltransferase OS=Mus spicilegus GN=Aprt PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 78/173 (45.09%), Postives = 111/173 (64.16%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            +P +  ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S  YSLEYGK  +E+   A++ G+R +IVDDL+ATGGT+ AA  LL ++   VVEC  ++EL  LKGRE LG   + S
Sbjct:    3 EPELKLVARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLASHLKSTHSGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKQGKLPGPTVSASYSLEYGKAELEIQKDALEPGQRVVIVDDLLATGGTMFAACDLLHQLRAEVVECVSLVELTSLKGRERLGPIPFFS 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMHC (Adenine phosphoribosyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=apt PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 3
Query:  231 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERA--LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            S IR + DFPKPGI+F+DITTLL +  AF   +    + YKDKNI  +AGIE+RGFIFG  +A  I   FVP+RKPKKLP   IS++YSLEYG D +E+H+ A    + A  L++DDL+ATGGT  AA+ L+ +     VE   +I L +  G E + E
Sbjct:   14 STIRDVKDFPKPGIIFKDITTLLNNKDAFNFLMSHLAKVYKDKNIDFIAGIESRGFIFGAALAAKINIPFVPIRKPKKLPYITISQKYSLEYGFDEIEIHIDAFSGVKNAKVLLIDDLIATGGTAKAAVELINQTNAKCVEACFLINLKDFGGAEKVAE 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACLD (Adenine phosphoribosyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=apt PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + ++PD+PK G+ F+DITTL+     +R   D  V   K+K I +V G EARGFI G P+A A+G  F P+RK  KLP EVI  +Y LEYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A +IEL  L+GR  L
Sbjct:    7 VTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVTYAKEKEIDLVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIELTYLEGRNKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ALKOO (Adenine phosphoribosyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=apt PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.617e-36
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + S IR I  FPK GI F+DITT+L + +A +   D   E+ KD NI ++ G EARGF+ G P+A  +G  FVP+RKP KLP E ++ EY LEYG D +++H  +++ G+R  IVDDL+ATGGT+ A  +++E +G  VV    +IEL  LKGR+ L
Sbjct:    3 LKSKIRQIEGFPKEGISFKDITTVLKEGEALQYVTDQLTEQLKDLNIDIIVGPEARGFLVGTPVAYKLGVGFVPVRKPGKLPAETLTYEYELEYGTDSLQIHKDSIRPGQRVAIVDDLLATGGTVLATAKMVEALGGQVVSMNFLIELTGLKGRDIL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SYMTH (Adenine phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 3
Query:  231 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            S IR + DFPKPGI F+DITTLL D +AF   I+     ++   I++V G EARG+IF   +A  + A FVP+RKP KLP +  S  Y LEYG+D +E+H  A Q G++ L+VDDL+ATGGT+ A I L+E +G  VV  A +IEL +L GR+ L
Sbjct:    5 SKIRTVDDFPKPGISFKDITTLLKDGEAFHAAIETMAAHFEPLGINMVTGPEARGYIFASALAFRLRAGFVPIRKPGKLPWKTRSISYQLEYGEDRLEVHEDAFQPGQKVLVVDDLLATGGTIRATIDLVESLGAKVVGVAVLIELSDLGGRKRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SULNB (Adenine phosphoribosyltransferase OS=Sulfurovum sp. (strain NBC37-1) GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 80/163 (49.08%), Postives = 108/163 (66.26%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV------GAVQAGERA--LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            I  +IR IPDFPKPGI+F+DITTLL + KA    +D   ERY   ++  +AGI+ARGFIFG  +A  +G  FVP+RK  KLP   ++E+YSLEYG D +E+H+      G    GER+  L++DDL+ATGGT  AA  L+++VG H VE   ++EL  L  +E
Sbjct:   11 ILDSIRDIPDFPKPGIVFKDITTLLNNPKALSTLMDHLTERYLGYDLDYIAGIDARGFIFGSILADRLGVGFVPVRKKGKLPYTTVAEKYSLEYGFDEVEIHIDAFGENGCCSTGERSKVLLIDDLIATGGTAKAAANLIDKVGAHCVEACFIMELGFLNSKE 173          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_BACC22.770e-3649.67Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_NEIMA3.617e-3644.38Adenine phosphoribosyltransferase OS=Neisseria men... [more]
APT_NEIM03.617e-3644.38Adenine phosphoribosyltransferase OS=Neisseria men... [more]
APT_NEIG13.617e-3644.38Adenine phosphoribosyltransferase OS=Neisseria gon... [more]
APT_MUSSI3.617e-3645.09Adenine phosphoribosyltransferase OS=Mus spicilegu... [more]
APT_CAMHC3.617e-3649.69Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_BACLD3.617e-3649.67Adenine phosphoribosyltransferase OS=Bacillus lich... [more]
APT_ALKOO3.617e-3647.77Adenine phosphoribosyltransferase OS=Alkaliphilus ... [more]
APT_SYMTH4.724e-3650.32Adenine phosphoribosyltransferase OS=Symbiobacteri... [more]
APT_SULNB4.724e-3649.08Adenine phosphoribosyltransferase OS=Sulfurovum sp... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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