FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NEIMF (Adenine phosphoribosyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=apt PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 71/160 (44.38%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  ++  IR I ++P+ GI+F DIT +L   + FR  +DL V RY D+ I +VAG++ARGFI G  +A  +   FVP+RK  KLP E +S+ Y+LEYG+  +E+H  AV+ G R L+VDDLVATGGT+ A + L+ ++G  +VE A ++E  +L+G + +
Sbjct:   10 VGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKGKLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NEIMB (Adenine phosphoribosyltransferase OS=Neisseria meningitidis serogroup B GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 70/160 (43.75%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  216 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +  ++  IR I ++P+ GI+F DIT +L   + FR  +DL V RY D+ I +VAG++ARGFI G  +A  +   FVP+RK  KLP E +S+ Y+LEYG+  +E+H  AV+ G R L+VDDL+ATGGT+ A + L+ ++G  +VE A ++E  +L+G + +
Sbjct:   10 VGALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFETVSQSYALEYGEAAVEIHTDAVKLGSRVLLVDDLIATGGTMLAGLELIRKLGGEIVEAAAILEFTDLQGGKNI 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CYAP8 (Adenine phosphoribosyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 82/159 (51.57%), Postives = 103/159 (64.78%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + IR IPDFPKPGIMF+DITTLL   +  R TID   E+ +   +    V G+E+RGF+FG P+A  + A FVP+RKP KLP  V   EY LEYG D +E+H  A+    R LIVDDL+ATGGT  A   LLE++G  V+  A +IEL  L GRE L
Sbjct:    3 LKALIRDIPDFPKPGIMFRDITTLLSHGEGLRYTIDTLTEKCQTAGLIPDYVVGMESRGFLFGVPLAYQLQAGFVPVRKPGKLPAAVHQVEYELEYGTDRLEIHQDALADHHRVLIVDDLIATGGTAKATADLLEKIGCEVLGFAFIIELTGLGGREKL 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOTH (Adenine phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 74/158 (46.84%), Postives = 108/158 (68.35%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + +R +PDFPK GI F DITT+L D +A ++ ID   ++ +      ++ G E+RGFIFG P+A A+G  FVP+RK  KLP + IS EY LEYG D++EMH+ A++ G+R +IVDDL+ATGGT  + I+L+E++G  ++     +EL  L GRE L
Sbjct:    3 LKAKLREVPDFPKEGINFIDITTVLQDPEALKECIDSMKKKVESFGEFDIIVGAESRGFIFGAPLAYALGKGFVPIRKKGKLPYKTISVEYELEYGTDILEMHIDAIKKGQRVVIVDDLLATGGTTKSNIKLVEQLGGEILGIVYFVELTFLNGREKL 160          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACFR (Adenine phosphoribosyltransferase OS=Bacteroides fragilis GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            +IR IPDFP PGI+F D+TTL  D++  ++  D+  E YKDK I+ V GIE+RGFI GP +A  +GA F+P+RKP KLP E + E Y  EYGKD +++H  A+   +  L+ DDL+ATGGT+ AA  L++++    V    +IEL EL G++
Sbjct:   11 SIREIPDFPIPGILFYDVTTLFKDSERLQELSDIMYEMYKDKGITKVVGIESRGFIMGPILATRLGAGFIPIRKPGKLPAETMEESYDKEYGKDTVQIHKDALNENDVVLLHDDLLATGGTMKAACNLVKKLYPKKVYVNFIIELKELNGKQ 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACFN (Adenine phosphoribosyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=apt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.724e-36
Identity = 72/152 (47.37%), Postives = 103/152 (67.76%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            +IR +PDFP PGI+F D+TTL  D++  ++  D+  E YKDK I+ V GIE+RGFI GP +A  +GA F+P+RKP KLP E + E Y  EYGKD +++H  A+   +  L+ DDL+ATGGT+ AA  L++++    V    +IEL EL G++
Sbjct:   11 SIREVPDFPIPGILFYDVTTLFKDSERLQELSDIMYEMYKDKGITKVVGIESRGFIMGPILATRLGAGFIPIRKPGKLPAETMEESYDKEYGKDTVQIHKDALNENDVVLLHDDLLATGGTMKAACNLVKKLHPKKVYVNFIIELKELNGKQ 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRU0 (Adenine phosphoribosyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHY 710
            I  I ++PK GI F+DI+ L+ D KA+   I    +   DK I ++ G EARGFI G P+A+ +G  F P+RKP KLP EV+S +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++E++G  V  CA +IEL  L GR+ LG+  Y
Sbjct:    7 IASIENYPKEGITFRDISPLMADGKAYSYAIREICQYAADKEIDMIVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPREVVSADYEKEYGLDTLTMHSDAIKPGQRVLIVDDLLATGGTVKATIEMVEKLGGVVAGCAFLIELDGLNGRQALGDIDY 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAW (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAU (Adenine phosphoribosyltransferase OS=Staphylococcus aureus GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAT (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_NEIMF4.724e-3644.38Adenine phosphoribosyltransferase OS=Neisseria men... [more]
APT_NEIMB4.724e-3643.75Adenine phosphoribosyltransferase OS=Neisseria men... [more]
APT_CYAP84.724e-3651.57Adenine phosphoribosyltransferase OS=Cyanothece sp... [more]
APT_CLOTH4.724e-3646.84Adenine phosphoribosyltransferase OS=Clostridium t... [more]
APT_BACFR4.724e-3648.03Adenine phosphoribosyltransferase OS=Bacteroides f... [more]
APT_BACFN4.724e-3647.37Adenine phosphoribosyltransferase OS=Bacteroides f... [more]
APT_STRU06.170e-3648.10Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STAAW6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAU6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAT6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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