FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAS (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAR (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAN (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain N315) GN=apt PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAM (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAE (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain Newman) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAAC (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAA9 (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain JH9) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAA8 (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAA3 (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain USA300) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAA2 (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain JH1) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STAAS6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAR6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAN6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAM6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAE6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAAC6.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAA96.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAA86.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAA36.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAA26.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
back to top