FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAA1 (Adenine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  KD+++ +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NOVAD (Adenine phosphoribosyltransferase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 74/153 (48.37%), Postives = 99/153 (64.71%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +R +PDFP PGI+F+DITTL+   +     ID    + +      VAG+EARGFIFG  +A  +G  F+P+RKP KLP + I  +Y+LEYG+D +E+   A++ G+R +IVDDL+ATGGT  AA  LL   G HV     VI+LPEL G E L
Sbjct:   10 VRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEARGFIFGAAVAARMGLGFIPVRKPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIVDDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAERL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMC5 (Adenine phosphoribosyltransferase OS=Campylobacter curvus (strain 525.92) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 78/157 (49.68%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  231 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGE--RALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            ++IR I DFPKPGI+F+DITTLL D +AF   +D    RY++  I  +AGIE+RGFIFG  +A  +   FVP+RKPKKLP   IS++YSLEYG D +++H+ A    E  R L++DDL+ATGGT  A++ L+++     VE   +I+L EL G  TL
Sbjct:   14 NSIRAIKDFPKPGIVFRDITTLLNDKEAFNFLMDHLTARYENFGIDFIAGIESRGFIFGAALAARLRLPFVPIRKPKKLPYITISQKYSLEYGVDEVQIHIDAFGEKEDARVLLIDDLIATGGTAKASVELIDQTKAKCVEACFLIDLKELGGSGTL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACHK (Adenine phosphoribosyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACCQ (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain Q1) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACC7 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain AH187) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACC1 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACC0 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain AH820) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACAN (Adenine phosphoribosyltransferase OS=Bacillus anthracis GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACAH (Adenine phosphoribosyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STAA16.170e-3648.41Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_NOVAD6.170e-3648.37Adenine phosphoribosyltransferase OS=Novosphingobi... [more]
APT_CAMC56.170e-3649.68Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_BACHK6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus thur... [more]
APT_BACCQ6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACC76.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACC16.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACC06.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACAN6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_BACAH6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus thur... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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