FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACAC (Adenine phosphoribosyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACAA (Adenine phosphoribosyltransferase OS=Bacillus anthracis (strain A0248) GN=apt PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.170e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE  K+++I +V G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYAKERDIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THETN (Adenine phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis GN=apt PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I   IR IPDFPK GI F+DIT +L D KAF  +I++  +  + +   ++A  EARGF+FG P+A  +G  FVP+RKP KLP E +S EY LEYG D +E+H  AV  G+R +IVDDL+ATGGT+ A+ +L+E +G  V     + EL  L GR+ L
Sbjct:    6 IKEMIREIPDFPKKGIRFKDITPVLKDAKAFNYSIEMLAKALEGRKFDLIAAPEARGFLFGAPLAFRLGVGFVPVRKPGKLPAETLSYEYELEYGLDSLEIHKDAVVKGQRVVIVDDLLATGGTVYASAKLVESLGGVVDSILFLTELTFLDGRKKL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEP3 (Adenine phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=apt PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I   IR IPDFPK GI F+DIT +L D KAF  +I++  +  + +   ++A  EARGF+FG P+A  +G  FVP+RKP KLP E +S EY LEYG D +E+H  AV  G+R +IVDDL+ATGGT+ A+ +L+E +G  V     + EL  L GR+ L
Sbjct:    6 IKMMIREIPDFPKKGIKFKDITPVLKDAKAFNYSIEMLAKALEGRKFDLIAAPEARGFLFGAPLAYRLGVGFVPVRKPGKLPAETLSYEYELEYGTDSLEIHKDAVLEGQRVVIVDDLLATGGTIYASAKLVESLGGIVDSIIFLTELTFLDGRKKL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_MASHI (Adenine phosphoribosyltransferase OS=Mastomys hildebrantii GN=APRT PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 77/173 (44.51%), Postives = 111/173 (64.16%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            +P +  ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S  Y+LEYGK  +E+   A++ G+R +IVDDL+ATGGT+ AA  LL ++   VVEC  ++EL  LKGRE LG   + S
Sbjct:    3 EPELQLVARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLASHLKSLHGGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKRGKLPGPTLSASYALEYGKAELEIQKDALEPGQRVVIVDDLLATGGTMCAACELLNQLRAEVVECVSLVELTSLKGRERLGPIPFFS 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACPL (Adenine phosphoribosyltransferase OS=Lactobacillus plantarum GN=apt PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 70/157 (44.59%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            IPD+P+PGI+F+DI+ L+ D +A+R+  D  V+  +DK++ ++ G EARGFI G P+A  +G  F P RK  KLP E +   Y LEYG+  + +H  A++ G+  L+ DDL+ATGGT+SA I+++E +G +VV  A ++EL EL GR+ + +   LS
Sbjct:   12 IPDYPEPGIIFRDISPLMADGEAYREATDQIVQFARDKHVDMIVGPEARGFIVGCPVAYELGVGFAPARKKGKLPRETVKATYDLEYGQSALYLHKDAIKPGQNVLVTDDLLATGGTISATIQMVEELGGNVVGTAFLVELKELHGRDKIKDYDMLS 168          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_DESMR (Adenine phosphoribosyltransferase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=apt PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.058e-36
Identity = 78/153 (50.98%), Postives = 97/153 (63.40%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPD+PK GI+F DIT LL D   FR  IDL  ER+ D   + +   EARGFIFG  +A  +G  FVP+RKP KLP + +S  Y LEYG D + MH  A+   E+ L++DDL+ATGGTLS  I L+E  G  +V    VIEL  L G+E L
Sbjct:    7 IRDIPDYPKEGILFFDITPLLGDPDGFRRAIDLLAERFADSGATKIVAAEARGFIFGAALAYKMGLGFVPVRKPGKLPYKTVSVSYDLEYGSDTLCMHEDALLRDEKVLVIDDLLATGGTLSGVIDLVEHFGADIVGIGVVIELEFLNGKEQL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_OCEIH (Adenine phosphoribosyltransferase OS=Oceanobacillus iheyensis GN=apt PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.052e-35
Identity = 74/153 (48.37%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++ D+PK GI F+DIT L+ D KAF+  +D  V+    K I +V G EARGFI G P++ A+   F P+RK  KLP EVI  +Y LEYG++V+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E++G  VV CA ++EL  L G++ L
Sbjct:    7 IEIVEDWPKEGIKFKDITPLMADGKAFKSAVDEIVDYANTKEIDLVVGPEARGFIVGCPVSYALEVGFAPVRKEGKLPREVIKVDYGLEYGENVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEQLGGIVVGCAFLVELGYLDGKDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEPX (Adenine phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=apt PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.375e-35
Identity = 76/157 (48.41%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I   IR IPDFPK GI F+DIT +L D +AF  +I++  +  + +   ++A  EARGF+FG P+A  +G  FVP+RKP KLP E +S EY LEYG D +E+H  AV  G+R +IVDDL+ATGGT+ A+ +L+E++G  V     + EL  L GR+ L
Sbjct:    6 IKMMIREIPDFPKKGIKFKDITPVLKDAQAFNYSIEMLAKALEGRKFDLIAAPEARGFLFGAPLAYRLGVGFVPVRKPGKLPAETLSYEYELEYGTDSLEIHKDAVLEGQRVVIVDDLLATGGTIYASAKLVEKLGGIVDSIIFLSELTFLDGRKKL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STOLO (Adenine phosphoribosyltransferase OS=Stochomys longicaudatus GN=APRT PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.375e-35
Identity = 77/173 (44.51%), Postives = 110/173 (63.58%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            +P +  ++  IR  PDFP  G++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S  Y+LEYGK  +E+   A++ G+R +IVDDL+ATGGT+ AA  LL ++   VVEC  ++EL  LKGRE LG   Y S
Sbjct:    3 EPELQLVARRIRSFPDFPVQGVLFRDISPLLKDPVSFRASIHLLASHLKSTHSGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKRGKLPGPTLSASYALEYGKAELEIQKDALEPGQRVVIVDDLLATGGTMCAACELLNQLRAEVVECVSLVELTSLKGRERLGPIPYFS 175          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_BACAC6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_BACAA6.170e-3649.02Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_THETN8.058e-3649.04Adenine phosphoribosyltransferase OS=Thermoanaerob... [more]
APT_THEP38.058e-3649.04Adenine phosphoribosyltransferase OS=Thermoanaerob... [more]
APT_MASHI8.058e-3644.51Adenine phosphoribosyltransferase OS=Mastomys hild... [more]
APT_LACPL8.058e-3644.59Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_DESMR8.058e-3650.98Adenine phosphoribosyltransferase OS=Desulfovibrio... [more]
APT_OCEIH1.052e-3548.37Adenine phosphoribosyltransferase OS=Oceanobacillu... [more]
APT_THEPX1.375e-3548.41Adenine phosphoribosyltransferase OS=Thermoanaerob... [more]
APT_STOLO1.375e-3544.51Adenine phosphoribosyltransferase OS=Stochomys lon... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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