FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PSEA8 (Adenine phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=apt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 72/157 (45.86%), Postives = 102/157 (64.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + S IR +PDFPKPG++F+DIT L    +A R T+D FV+RY + + S +  ++ARGF+ G  +A A+    V  RK  KLP +V++E Y  EYG+  +E+H  ++  G+  LI DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G   L
Sbjct:    8 LKSQIRAVPDFPKPGVVFRDITPLFQSPRALRMTVDSFVQRYIEADFSHIGAMDARGFLIGSAVAYALNKPLVLFRKQGKLPADVLAEGYQTEYGEAFLEVHADSLCEGDSVLIFDDLIATGGTLLAAASLVRRLGARVFEAAAIIDLPELGGSTRL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PROAC (Adenine phosphoribosyltransferase OS=Propionibacterium acnes GN=apt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I+S IR +PDFP+PG+ F+DIT LL +   +   I   V+    +++ VV G+EARGF+F  P+AL++GA FVP+RKP KLPG+V S+ + LEYG   + +H  AVQ G + LIVDD++AT GT+ A   L+E++G  +V  + +IEL  L GRE L
Sbjct:    8 IASLIRDVPDFPEPGVTFKDITPLLANPNGYAAAISELVDT-ASRDVDVVLGMEARGFMFAGPVALSLGAGFVPVRKPGKLPGDVYSQSFVLEYGSATLTVHQDAVQPGSKVLIVDDVLATAGTVRATASLVEQLGAELVGVSVLIELSALGGREKL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ERYLH (Adenine phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=apt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + IR +PDFP PGI F+DITTLL   +    T+    E  +      +AG+EARGFIFG  +A+ +G  F+P+RKP KLP   I  +Y LEYG D +E+  GAV+AG++ +IVDDL+ATGGT  AA +LL + G  V +   VI+LPEL G + L
Sbjct:    6 LKALIRTVPDFPAPGIQFRDITTLLAHGEGLAATMRHLGEAARLAGAEAIAGMEARGFIFGAGVAVELGLGFLPIRKPGKLPASTIGVDYDLEYGTDRLEIDPGAVEAGQKVVIVDDLIATGGTALAAAKLLRQAGAEVGQALFVIDLPELGGAQRL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACCN (Adenine phosphoribosyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=apt PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 74/153 (48.37%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ + KA++   D  V   K++NI +V G EARGFI G P++ A+   F P+RK  KLP E+I  +Y  EYGKDV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L+GRE L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNNGKAYKAATDEIVAYAKERNIDLVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREIIKVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIQLVEELGGIVAGIAFLVELTYLEGREKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT1_METM5 (Adenine phosphoribosyltransferase 1 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=apt1 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR++ DFP  GI F+D+T +L D KA + T     +  +DKN+ V+ G EARGF+FG P+A  +   FVP+RKP KLP +  S +Y+LEYG D +E+H   ++ G+   IVDDL+ATGGT+    +L+E++G HV     VIEL ELKGR+ L
Sbjct:    7 IRIVEDFPIEGISFKDVTPILKDPKAMKHTTKEITKYLEDKNVDVIVGPEARGFLFGIPVAHELDIGFVPVRKPGKLPYKTFSVDYALEYGADSLEIHSDGIEKGQNVAIVDDLLATGGTVLGVSKLVEKLGGHVSALNFVIELTELKGRDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRA5 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype V GN=apt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35
Identity = 73/157 (46.50%), Postives = 106/157 (67.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++E++G  V  CA ++EL  L GR+ +
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVISADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVVAGCAFLVELDGLNGRKAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRA3 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype III GN=apt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35
Identity = 73/157 (46.50%), Postives = 106/157 (67.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++E++G  V  CA ++EL  L GR+ +
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVISADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVVAGCAFLVELDGLNGRKAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_RAT (Adenine phosphoribosyltransferase OS=Rattus norvegicus GN=Aprt PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35
Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +S  YSLEYGK  +E+   A++ G++ +IVDDL+ATGGT+ AA  LL ++   VVEC  ++EL  LKGRE LG   + S
Sbjct:    9 VARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLAGHLKSTHGGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKRGKLPGPTVSASYSLEYGKAELEIQKDALEPGQKVVIVDDLLATGGTMCAACELLSQLRAEVVECVSLVELTSLKGREKLGPVPFFS 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_MUSPA (Adenine phosphoribosyltransferase OS=Mus pahari GN=Aprt PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.062e-35
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            ++  IR  PDFP PG++F+DI+ LL D  +FR +I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  IS  Y+LEYGK  +E+   A++ G+R +IVDDL+ATGGT+ AA  LL ++   VVEC  ++EL  LKGRE LG   + S
Sbjct:    9 VARRIRSFPDFPIPGVLFRDISPLLKDPDSFRASIRLLASHLKSTHSGKIDYIAGLDSRGFLFGPSLAQELGVGCVLIRKQGKLPGPTISASYALEYGKAELEIQKDALEPGQRVVIVDDLLATGGTMFAACDLLHQLRAEVVECVSLVELTSLKGRERLGPIPFFS 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEM4 (Adenine phosphoribosyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=apt PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.999e-35
Identity = 76/160 (47.50%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            IR IPDFP+ GI+F+DIT LL + +AF   ID  V + K+   + +   EARGFIFG  +A  +G   VP+RKP KLP +VISE+YSLEYG+  ++MH+ A+  GE+ +I DD++ATGGT  A  +L+E+ G  VV  A +IEL  L  R+ L +++ +S
Sbjct:   12 IRDIPDFPEKGIIFRDITPLLKNPEAFNFAIDQLVNKLKEIEFNTIVAPEARGFIFGGALAYKLGKGLVPVRKPGKLPYKVISEKYSLEYGEAELQMHIDAISQGEKVIIFDDVLATGGTALALKKLVEKAGGEVVSMAFLIELTYLNPRKLLSKENIIS 171          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PSEA82.345e-3545.86Adenine phosphoribosyltransferase OS=Pseudomonas a... [more]
APT_PROAC2.345e-3547.77Adenine phosphoribosyltransferase OS=Propionibacte... [more]
APT_ERYLH2.345e-3547.77Adenine phosphoribosyltransferase OS=Erythrobacter... [more]
APT_BACCN2.345e-3548.37Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT1_METM52.345e-3547.71Adenine phosphoribosyltransferase 1 OS=Methanococc... [more]
APT_STRA53.062e-3546.50Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRA33.062e-3546.50Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_RAT3.062e-3545.51Adenine phosphoribosyltransferase OS=Rattus norveg... [more]
APT_MUSPA3.062e-3546.11Adenine phosphoribosyltransferase OS=Mus pahari GN... [more]
APT_THEM43.999e-3547.50Adenine phosphoribosyltransferase OS=Thermosipho m... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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