FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEAB (Adenine phosphoribosyltransferase OS=Thermosipho africanus (strain TCF52B) GN=apt PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.999e-35
Identity = 72/160 (45.00%), Postives = 110/160 (68.75%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            IR IPDFP+ GI+F+DIT LL D +AF+  ID+  E+  + +  ++   EARGFIFG  ++  +   F+P+RKP KLP EVISE+Y+LEYG+  ++MHV ++  G++ +I DD++ATGGT  A  +L+E+ G  VV  + +IEL  L  R+ L +++ +S
Sbjct:    7 IRDIPDFPEKGIIFRDITPLLKDKEAFKHAIDMLAEKLSEIDFDLIVAPEARGFIFGGALSYKLNKGFIPVRKPGKLPYEVISEKYTLEYGEAELQMHVDSINKGQKVIIFDDVLATGGTAKALKKLVEKAGGEVVAMSFLIELSYLNPRDILKDENIIS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_DESAD (Adenine phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=apt PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.999e-35
Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFPK GI++ DIT LL + KAF+ TID   ER+ D  I  +A  EARGFIFG P+A  +   FVP+RKP KLP E IS  Y LEYG D + MHV AV   E  L++DD++ATGGT    ++L+E+ G  V     + EL  L G+  L
Sbjct:    7 IRDIPDFPKEGIVYFDITPLLAEPKAFQYTIDQLAERFADYKIDKIAAAEARGFIFGAPLATKLDIGFVPIRKPGKLPYETISVSYDLEYGTDNLSMHVDAVAKDENVLLIDDVLATGGTAEGMVKLVEKAGGKVSGMGFIAELTFLDGKSKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT2_METMP (Adenine phosphoribosyltransferase 2 OS=Methanococcus maripaludis GN=apt2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.999e-35
Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR++ +FP  GI F+D+T +L D KA + T     +  +DKN+ VV G EARGF+FG P+A  +   FVP+RKP KLP +  S +Y+LEYG D +E+H   ++ G+   IVDDL+ATGGT+    +L+E++G HV     VIEL ELKGR+ L
Sbjct:    7 IRIVENFPIEGISFKDVTPILKDPKAMKHTTKEIAKYLEDKNVDVVVGPEARGFLFGVPVAHELDIGFVPVRKPGKLPYKTFSVDYALEYGSDSLEIHSDGIEKGQNVAIVDDLLATGGTVLGVSKLVEKLGGHVSALNFVIELTELKGRDKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEP1 (Adenine phosphoribosyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=apt PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFP+ GI+F+DIT LL + +AF++ ID   E   D++  +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  AV+ G+R LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+ L
Sbjct:    7 IRDIPDFPQKGIVFRDITPLLRNQEAFKEAIDRMCELVSDRDFDLVVAPEARGFILGATMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTERLHIHEDAVEKGQRVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRA1 (Adenine phosphoribosyltransferase OS=Streptococcus agalactiae serotype Ia GN=apt PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +++ I  I ++P+ GI F+DI+ L+ D KA+   +   V+   DK+I ++ G EARGFI G P+A A+G  F P+RKP KLP EVIS  Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++E++G  V  CA ++EL  L GR+ +
Sbjct:    3 LNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKDIDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVISANYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVVAGCAFLVELDGLNGRKAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_GLUOX (Adenine phosphoribosyltransferase OS=Gluconobacter oxydans GN=apt PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 75/164 (45.73%), Postives = 108/164 (65.85%), Query Frame = 3
Query:  204 QDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            QDP+   + + IR IPDFPK GI+F DI+TL+    A++                ++AGIE+RGF+   P+AL +G  F  +RKP KLPG+ IS +Y LEYG+D + +   A++ G+R +++DDL+ATGGTL+A+I LL +VG  VV  + +IEL +LKGRE L
Sbjct:    4 QDPQPLDLKNYIREIPDFPKRGILFYDISTLIRSPDAWQVATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIELADLKGREKL 167          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FRATW (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=apt PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLSGREVL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BLOFL (Adenine phosphoribosyltransferase OS=Blochmannia floridanus GN=apt PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.223e-35
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR 686
            D ++  I   I+ IP++PK GI+F+DIT LL +  A+   I L  + YK+  ++ + G+EARGF+FG P+AL +   F+P RK  +LP   ISE Y LEYG   +EMH  ++  G+R LIVDDL+ATGGT+ A ++L+ R+G  V   A VI+L +L G+
Sbjct:    6 DHQLTLIKENIKFIPNYPKQGILFRDITALLENPHAYSACIKLLADHYKNHQLTKIVGVEARGFLFGSPLALILKLGFIPARKAGRLPRNTISESYVLEYGTGCLEMHNDSIIPGDRVLIVDDLLATGGTIKAVVKLIRRLGGEVYHAAFVIDLEKLGGK 165          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_RHOCS (Adenine phosphoribosyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=apt PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.822e-35
Identity = 72/157 (45.86%), Postives = 102/157 (64.97%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S IR +PDFPKPGI+F DI+TLL   +A++ T++   E        ++ GIE+RGF+   P++LA+G  F  +RK  KLPG+ I   Y LEYG D +E+   A+  G+R +++DDL+ATGGT++AAI LL  VG  V   A ++EL  L GR+ L
Sbjct:    3 IRSHIRTVPDFPKPGILFYDISTLLAHAEAWKATVEKLAEAVAPHKPDLLVGIESRGFLVAAPLSLALGCGFAMVRKKGKLPGQTIRYTYDLEYGTDTVEIQADAIAPGQRVVVLDDLLATGGTMAAAIHLLRSVGADVTAAAFIMELAFLNGRDRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FRATO (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=apt PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.822e-35
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  +++AG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDSLGGREVL 164          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_THEAB3.999e-3545.00Adenine phosphoribosyltransferase OS=Thermosipho a... [more]
APT_DESAD3.999e-3550.33Adenine phosphoribosyltransferase OS=Desulfovibrio... [more]
APT2_METMP3.999e-3547.71Adenine phosphoribosyltransferase 2 OS=Methanococc... [more]
APT_THEP15.223e-3549.02Adenine phosphoribosyltransferase OS=Thermotoga pe... [more]
APT_STRA15.223e-3546.50Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_GLUOX5.223e-3545.73Adenine phosphoribosyltransferase OS=Gluconobacter... [more]
APT_FRATW5.223e-3548.43Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_BLOFL5.223e-3545.00Adenine phosphoribosyltransferase OS=Blochmannia f... [more]
APT_RHOCS6.822e-3545.86Adenine phosphoribosyltransferase OS=Rhodospirillu... [more]
APT_FRATO6.822e-3547.80Adenine phosphoribosyltransferase OS=Francisella t... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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