FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FRAT1 (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=apt PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.910e-35
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP    S +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FLAJ1 (Adenine phosphoribosyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=apt PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.910e-35
Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            I + IR I  FPK GI+F+DIT LL + +A ++ + + V   K + I  V G E+RGF FG  +A  + A F+P+RKPKKLP ++IS  Y LEYG D +EMH+ A++ G+R LI DD++ATGGT  A   L+E++G  +V+C  ++EL  L GR+ + E
Sbjct:    3 IENYIRDIQGFPKEGILFKDITPLLNNVEARQECLSILVNSLKGQKIDKVVGAESRGFFFGMLLAQELKAGFIPVRKPKKLPFDIISASYELEYGTDSLEMHIDAIKKGDRVLIHDDVLATGGTAKAVCELVEKLGGEIVQCNFLMELTFLNGRKKIKE 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_EUBR3 (Adenine phosphoribosyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=apt PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.910e-35
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            +   IR IPDFP+ GIMF+D+T+++ D    +  ID  ++R    +  V+AG E+RGF+FG PIA A+   FV +RK  KLP E +S+ Y LEYG   +EMH  +V+ G++ ++VDDL+ATGGT+ AA  L+E +G  VV+   +IEL  L GR+ L +
Sbjct:    4 VKDYIRTIPDFPEKGIMFRDVTSVIQDADGLKLAIDEMIKRLDGLDFDVIAGAESRGFVFGMPIAYALHKPFVMVRKAGKLPCETVSKTYDLEYGTATIEMHKDSVKPGQKVVLVDDLIATGGTMQAAAELVEELGGEVVKMLFLIELAGLNGRKLLSK 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACTN (Adenine phosphoribosyltransferase OS=Bacteroides thetaiotaomicron GN=apt PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.910e-35
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            +IR IPDFP PGI+F D+TTL  D    ++  ++  E YKDK I+ V GIE+RGFI GP +A  + A F+P+RKP KLP EVI E Y  EYG D +++H  A+   +  L+ DDL+ATGGT+ AA  L++++    V    +IEL +L G+   G+
Sbjct:   11 SIREIPDFPIPGILFYDVTTLFKDPWCLQELSNIMFEMYKDKGITKVVGIESRGFIMGPILATRLNAGFIPIRKPGKLPAEVIEESYDKEYGTDTVQIHKDALDENDVVLLHDDLLATGGTMKAACELVKKLKPKKVYVNFIIELKDLNGKSVFGD 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAES (Adenine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=apt PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.164e-34
Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+P  G+ F+DITT++ + +A+    D  VE  K+KNI +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY+LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G + + +   +S
Sbjct:   10 VKDWPSAGVSFKDITTIMDNGEAYGYATDQIVEYAKEKNIDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYNLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEQLGGIVVGIAFIIELKYLNGIDKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAEQ (Adenine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=apt PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.164e-34
Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+P  G+ F+DITT++ + +A+    D  VE  K+KNI +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY+LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G + + +   +S
Sbjct:   10 VKDWPSAGVSFKDITTIMDNGEAYGYATDQIVEYAKEKNIDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYNLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEQLGGIVVGIAFIIELKYLNGIDKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BRAHW (Adenine phosphoribosyltransferase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=apt PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.164e-34
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR I D+PK GI+F+DITTLL +  AF+  ID   E+   + I  + G E+RGF+ G  +A  +   F+P+RK  KLP + ISEEY+LEYG D + MH  A++ GER LIVDDL+ATGGT  A I+++E++   VV  + +IEL EL GR+ +
Sbjct:    7 IRNIQDYPKKGILFRDITTLLQNKDAFKYAIDKMAEQISSEKIDYIVGAESRGFLIGSALAYKLNCGFIPVRKKGKLPYKTISEEYALEYGTDTLYMHEDAIKKGERVLIVDDLIATGGTALAMIKMVEKLEGIVVGSSFLIELKELNGRKEI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACWK (Adenine phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=apt PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.164e-34
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I ++PD+PK GI+F+DIT L+ D KA++   D  VE    ++I VV G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYG DV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L
Sbjct:    7 IAIVPDYPKEGIVFKDITPLMNDGKAYKAATDAIVEYANKRDIDVVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGTDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKML 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ARTS2 (Adenine phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=apt PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.164e-34
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I+S    +PD+PKPGI+F+D+T +  +  A R  +D  VE +K +    VAG+EARGF+     A A     + +RK  KLP +VISE+Y+LEYG   +E+H   + AG R LI+DD++ATGGTL AA RL ER GVHV     V+EL EL+GR  L
Sbjct:   19 INSLCATVPDYPKPGIIFKDLTPVFANGAALRAVVDALVEPFKGQ-FDAVAGVEARGFLLAAAAAYATDTGVITVRKAGKLPRKVISEDYALEYGTATLELHTADLPAGSRVLILDDVLATGGTLGAAARLFERCGVHVAGVGVVMELGELRGRSAL 174          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_TREDE (Adenine phosphoribosyltransferase OS=Treponema denticola GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 76/159 (47.80%), Postives = 101/159 (63.52%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            I +AIR +PDFPK GI+F DIT +L++ + F   +D   E YKDK +  VA IEARGFIF  P A  +G   + +RK  KLPGE  S  Y LEYG+  +E+H   V  G++ L++DDL+ATGGTL+AA  +LE  G  VV    V+ LP L   + LG+
Sbjct:   18 IDAAIRRVPDFPKKGILFYDITGILVNPEVFSYCLDKMTEMYKDKKVDAVAAIEARGFIFAAPFAYKMGIPLILIRKKGKLPGETYSASYDLEYGQASVEVHKTDVVKGQKVLLLDDLIATGGTLNAARSILEEGGAKVVGFCGVVGLPFLNYSKVLGD 176          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_FRAT18.910e-3548.43Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FLAJ18.910e-3545.91Adenine phosphoribosyltransferase OS=Flavobacteriu... [more]
APT_EUBR38.910e-3545.28Adenine phosphoribosyltransferase OS=Eubacterium r... [more]
APT_BACTN8.910e-3546.15Adenine phosphoribosyltransferase OS=Bacteroides t... [more]
APT_STAES1.164e-3447.77Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_STAEQ1.164e-3447.77Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_BRAHW1.164e-3448.37Adenine phosphoribosyltransferase OS=Brachyspira h... [more]
APT_BACWK1.164e-3448.37Adenine phosphoribosyltransferase OS=Bacillus weih... [more]
APT_ARTS21.164e-3447.77Adenine phosphoribosyltransferase OS=Arthrobacter ... [more]
APT_TREDE1.520e-3447.80Adenine phosphoribosyltransferase OS=Treponema den... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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