FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THESQ (Adenine phosphoribosyltransferase OS=Thermotoga sp. (strain RQ2) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFP+ GI+F+DIT LL + +AF++ ID   E   DK   +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+ L
Sbjct:    7 IRDIPDFPQKGIVFRDITPLLRNQEAFKEAIDRMCELVFDKEFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THENN (Adenine phosphoribosyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFP+ GI+F+DIT LL D++AFR+ ID   +   D++  +V   EARGFI G  +A  +G  FVP+RKP KLP   + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  V   A ++EL  L  R+ L
Sbjct:    7 IRDIPDFPQKGIIFRDITPLLKDSRAFREAIDRMCDLVSDRDFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYRTVYEEYQLEYGTEQLHIHEDAIERGQKVLIVDDVLATGGTAEALIRLVKKLGGEVSALAFLVELSYLNPRKRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRTD (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRT2 (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRT1 (Adenine phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 74/153 (48.37%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  I ++PK G+ F+DI+ L+ D  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP +VIS +Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GRE +
Sbjct:    7 IATIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPRKVISVDYEKEYGVDTLCMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STAS1 (Adenine phosphoribosyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 74/157 (47.13%), Postives = 107/157 (68.15%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PKPG+ F+DITT++ + +A+    D  VE  K +++ ++ G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ AAI+L+E++G  VV  A +IEL  L G E + +   +S
Sbjct:   10 VEDWPKPGVNFKDITTIMDNGEAYGYATDQIVEYAKLRDVDIIVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACICJ (Adenine phosphoribosyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=apt PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34
Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFPKPGI+F DI+TL+    A++  +    +  +  +  ++AG+E+RGFI   P+AL +G  F+ +RK  KLPG  +  +Y LEYG+D +E+   AVQ G+R ++VDDL+ATGGT++A I+LL +VG  V   A +IEL  LKGR+ L
Sbjct:    7 IRGIPDFPKPGILFYDISTLIRHADAWQVAMGRLAKVVRAHHPDLLAGVESRGFILAAPLALKLGCGFIMLRKRGKLPGATVGYDYDLEYGQDRIEIQADAVQPGQRVVVVDDLLATGGTMAAGIKLLRKVGAEVPAAAALIELAFLKGRDRL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PSEA7 (Adenine phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 70/157 (44.59%), Postives = 101/157 (64.33%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + S IR +PDFPK G++F+DIT L    +A R T+D FV+RY + + S +  ++ARGF+ G  +A A+    +  RK  KLP +V++E Y  EYG+  +E+H  ++  G+  LI DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G   L
Sbjct:    8 LKSQIRAVPDFPKAGVVFRDITPLFQSPRALRMTVDSFVQRYIEADFSHIGAMDARGFLIGSAVAYALNKPLILFRKQGKLPADVLAEAYQTEYGEAFLEVHADSLCEGDSVLIFDDLIATGGTLLAAASLVRRLGARVFEAAAIIDLPELGGSTRL 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_MAGSA (Adenine phosphoribosyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            I   IR +PDFPKPGI+F DI+TLL    A++  +             V+AGI++RGF+   P+AL +G  FV +RK  KLPGE I  +Y+LEYG D +E+  GA++ G+R +I+DDL+ATGGT++A + LL ++G HV     +I+L  L G++ L E
Sbjct:    3 IKDHIRGVPDFPKPGILFYDISTLLAHPDAWQVAMGRMAREIIKFQPDVLAGIDSRGFLVAAPLALKLGCGFVMLRKKGKLPGETIRHDYALEYGTDTIEIQKGAIEEGKRVVILDDLLATGGTMAAGVELLRKIGAHVTGAGTIIDLAFLPGKQRLKE 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_KINRD (Adenine phosphoribosyltransferase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 75/162 (46.30%), Postives = 99/162 (61.11%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEK 704
            A + +  R + DFP+PG++F+DIT LL D +AF   ++      +    S VAGIEARGF+   P A   G  F P+RK  KLP  V+  EY+LEYG   +E+  G V AGER L+VDD++ATGGT  AA  LLE  G  VV  A ++EL  L GR  LG++
Sbjct:   15 ATVVAGFRDVVDFPQPGVVFKDITPLLADARAFATVVEALAALARASGASAVAGIEARGFMLAAPAAERAGLGFWPVRKAGKLPAPVLRREYALEYGTAALELSAGTVGAGERVLVVDDVLATGGTARAACELLEEAGAQVVALAVLLELAPLGGRPRLGDR 176          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_THESQ1.520e-3448.37Adenine phosphoribosyltransferase OS=Thermotoga sp... [more]
APT_THENN1.520e-3447.71Adenine phosphoribosyltransferase OS=Thermotoga ne... [more]
APT_STRTD1.520e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRT21.520e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRT11.520e-3448.37Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STAS11.520e-3447.13Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_ACICJ1.520e-3447.06Adenine phosphoribosyltransferase OS=Acidiphilium ... [more]
APT_PSEA71.985e-3444.59Adenine phosphoribosyltransferase OS=Pseudomonas a... [more]
APT_MAGSA1.985e-3444.65Adenine phosphoribosyltransferase OS=Magnetospiril... [more]
APT_KINRD1.985e-3446.30Adenine phosphoribosyltransferase OS=Kineococcus r... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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