FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ENTFA (Adenine phosphoribosyltransferase OS=Enterococcus faecalis GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 73/153 (47.71%), Postives = 101/153 (66.01%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  IPD+P+ GI+F+DI+ L+ +  A+R+     V+  K+K I +V G EARGFI G P+A  +G  F P+RK  KLP E I   Y LEYG D + +H  A+  G+R LI DDL+ATGGT+ A I L+E++G  VV CA +IEL +L GR+ +
Sbjct:    7 IASIPDYPEKGIVFRDISPLMANGDAYREATKQIVDYAKEKRIDMVVGPEARGFIVGCPVAYELGVGFAPVRKKGKLPRETIEVTYDLEYGSDTLTLHKDAITPGQRVLICDDLLATGGTIKATIELVEQLGGIVVGCAFLIELMDLHGRDKI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_BACV8 (Adenine phosphoribosyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 72/159 (45.28%), Postives = 102/159 (64.15%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            + + +R IPDFP PGI+F D+TTL  + +  ++ +D   E YKDK I+ V GIE+RGFI G  +A  +GA FV  RKP KLP EV+ E Y+ EYG D +++H  A+   +  L+ DDL+ATGGT++A  RL++R G   +    +IEL  L GR+   E
Sbjct:    6 LKANLREIPDFPIPGILFYDVTTLFKNPECLQEILDTLYEMYKDKGITKVVGIESRGFIMGGALAARLGAGFVMARKPGKLPAEVVEETYAKEYGTDTIQIHKDAIDENDVVLLHDDLLATGGTMAATHRLVQRCGAKKIFINFIIELGGLNGRKAFPE 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ANATD (Adenine phosphoribosyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=apt PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 74/157 (47.13%), Postives = 104/157 (66.24%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +    R + +FPK GI F DITT+L D  AF+  ID  V   KD +  ++ G E+RGFIFG P+A  +    V +RK  KLP + +S EY LEYGKDV+EMH+ A++ G++ +I+DDL+ATGGT  + I+L+E++G  VV  A ++EL  L GRE L
Sbjct:    3 LKEKFRHVLNFPKEGIDFIDITTVLQDKDAFKYAIDSLVNLVKDLDFELIVGPESRGFIFGAPVAYVLNKGLVLVRKKGKLPYKTVSVEYELEYGKDVLEMHIDAIKPGQKVVIIDDLLATGGTTLSNIKLVEKLGGEVVGIAYLVELTYLGGRENL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_NATTJ (Adenine phosphoribosyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=apt PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.592e-34
Identity = 75/155 (48.39%), Postives = 102/155 (65.81%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            IR IPDFPK G++F+DITT L D +   + I      Y+ +    + GIE+RGFI GP IA  +GA FVP RK  KLP +  S+EY+ EY  DV+E+H  A++  ER LIVDDL+ATGGT  A  +++E++   VV  A ++EL  LKGRE +G+
Sbjct:    8 IRDIPDFPKKGVVFKDITTALKDPELLAEIIINLSSHYEKEVPDKIVGIESRGFILGPAIAKELGAGFVPARKGGKLPSKTASQEYNTEYSTDVLEIHEDAIEKNERVLIVDDLLATGGTAQATAKIVEQLEGQVVGFAFMLELSFLKGREKIGD 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_KOSOT (Adenine phosphoribosyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=apt PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.592e-34
Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFPKPGI+F+D+T +L D  AF+  I    E  KD   +++   EARGFIF  P+AL +   FVP+RKP KLP + +S EYSLEYG   +EMH  A++ G++ LIVDD++ATGGT+ A   ++E+VG  +     ++EL  L+ R+ L
Sbjct:    7 IRDIPDFPKPGIIFKDVTPMLKDPGAFKVCISSLKELVKDFEFNLIVAPEARGFIFAAPLALELEKGFVPIRKPGKLPYKTVSVEYSLEYGTATLEMHTDAIKEGDKVLIVDDVLATGGTMKAIAEMVEKVGGTISGIVSLVELSFLEPRKKL 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FRAP2 (Adenine phosphoribosyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=apt PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.592e-34
Identity = 78/166 (46.99%), Postives = 103/166 (62.05%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            I   I  +PDFPKPGI+F+DIT LL D +  + T     E  K K I  +V+AG E+RGFIFG  +A  +G  FVP+RKP KLP E     Y LEYG D +E+H  A +  ++ L+VDDL+ATGGT  A ++L+E+    V     VIEL +L GR+ L E H +S
Sbjct:    6 IKDRIVAVPDFPKPGIVFRDITPLLADPQGLKMTAKAMAEELKSKGIKPTVIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLPRETYKVSYQLEYGSDSLEIHKDAFKPTDKVLVVDDLLATGGTAKATVQLIEKTQASVAGLIFVIELEDLNGRKVL-EGHNVS 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_THEMA (Adenine phosphoribosyltransferase OS=Thermotoga maritima GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34
Identity = 73/153 (47.71%), Postives = 104/153 (67.97%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR IPDFP+ GI+F+DIT LL + +AF++ ID   E   D+   +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+ L
Sbjct:   10 IRDIPDFPQKGIVFRDITPLLRNQEAFKEAIDRMCELVFDREFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 162          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACSS (Adenine phosphoribosyltransferase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +PDFP+ G+ F+DI+ L+ D +A+    D  VE  K+K + ++ G EARGFI G P+A  +G  F P RK  KLP E +S  Y LEYGK  + MH  AV+ G++ L+ DDL+ATGGT++A I+++E +G  VV  A  IEL +L GRE +
Sbjct:   12 VPDFPEAGVTFRDISPLMSDGEAYAAATDKIVEYAKNKGVEMIVGPEARGFIVGCPVAYKLGVGFAPARKKGKLPRETVSASYGLEYGKSTLYMHKDAVKPGQKVLVTDDLLATGGTIAATIKMVEELGGIVVGTAFFIELKDLNGREKI 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_ACIC1 (Adenine phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=apt PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34
Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +++ IR IPD+P PGI+F+DIT LL +   F   +D  V  Y+   +  V GIEARGFI   P+A  +GA FVPMRK  KLP   +   Y+LEYG   +E+HV A + G+R L+VDD++ATGGT +AA+ L+++     V  + +IEL  L GR  L
Sbjct:   10 VAAHIRDIPDYPSPGIVFKDITPLLAEPAVFAAVVDALVRDYQHGTVDKVVGIEARGFIVAAPVAYHLGAGFVPMRKKGKLPYRTLETSYALEYGTATIEVHVDAFRPGDRVLVVDDVLATGGTAAAALELIDQASAKAVGLSFLIELSALGGRSRL 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_XANCP (Adenine phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=apt PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.422e-34
Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  228 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR 686
            S  IR I DFPKPGI+F+DIT LL D   F   +D   + ++   +  V GIEARGFI G  +A  +   FVP+RKP KLPG  + +EY+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR
Sbjct:   19 SGRIRDIADFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGR 171          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ENTFA1.985e-3447.71Adenine phosphoribosyltransferase OS=Enterococcus ... [more]
APT_BACV81.985e-3445.28Adenine phosphoribosyltransferase OS=Bacteroides v... [more]
APT_ANATD1.985e-3447.13Adenine phosphoribosyltransferase OS=Anaerocellum ... [more]
APT_NATTJ2.592e-3448.39Adenine phosphoribosyltransferase OS=Natranaerobiu... [more]
APT_KOSOT2.592e-3447.71Adenine phosphoribosyltransferase OS=Kosmotoga ole... [more]
APT_FRAP22.592e-3446.99Adenine phosphoribosyltransferase OS=Francisella p... [more]
APT_THEMA3.386e-3447.71Adenine phosphoribosyltransferase OS=Thermotoga ma... [more]
APT_LACSS3.386e-3446.67Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_ACIC13.386e-3445.86Adenine phosphoribosyltransferase OS=Acidothermus ... [more]
APT_XANCP4.422e-3449.02Adenine phosphoribosyltransferase OS=Xanthomonas c... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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