FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_GRAFK (Adenine phosphoribosyltransferase OS=Gramella forsetii (strain KT0803) GN=apt PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSCS 722
            + S +R I DFPK G+ ++DIT LLLD +A R  + LF++      I  V GIE+RGF F   +A  + A F+P+RKP KLP     E Y LEYG D +E+H  A++ GE+ L+ DD++ATGGT +A  +L+E+ G  +V+C  ++EL  LKG + L  K Y  CS
Sbjct:    3 LKSYVREIADFPKKGVSYKDITPLLLDPEAMRLAVKLFMKNLPHGKIDKVVGIESRGFFFATMLAEKLNAGFIPVRKPGKLPHRTHKENYDLEYGSDSLEIHEDAIKKGEKVLLHDDVLATGGTAAATCKLIEKCGGEIVQCNFLVELEFLKGVDKL--KGYDVCS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_COPPD (Adenine phosphoribosyltransferase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=apt PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34
Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 3
Query:  213 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            R+  +   IR IP+FP  G++F+DIT LL +  AF  T+DL  E     N++ VA +EARGFI+G  +A  +G  F+P+RKP KLP EV+ +E+ LEYGKDV+++H  A   G+  LIVDD++ATGGT  AA  L+  +G  V     ++ L  + G E L +
Sbjct:    2 RVDDLRQYIRDIPNFPTEGVIFRDITPLLKNPDAFATTVDLMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSK 164          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRMU (Adenine phosphoribosyltransferase OS=Streptococcus mutans GN=apt PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34
Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + I  I D+P+ G+ F+DI+ L+ +  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP EVI   Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GR+ +
Sbjct:    3 LKNYIATIEDYPQEGVTFRDISPLMANGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAYELGVGFAPVRKPGKLPREVIEAHYEKEYGIDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGIVAGCAFLIELDGLDGRQAI 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_HUMAN (Adenine phosphoribosyltransferase OS=Homo sapiens GN=APRT PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34
Identity = 74/173 (42.77%), Postives = 107/173 (61.85%), Query Frame = 3
Query:  207 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKN---ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            D  +  +   IR  PDFP PG++F+DI+ +L D  +FR  I L     K  +   I  +AG+++RGF+FGP +A  +G   V +RK  KLPG  +   YSLEYGK  +E+   A++ G+R ++VDDL+ATGGT++AA  LL R+   V+EC  ++EL  LKGRE L    + S
Sbjct:    3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFS 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PSEU2 (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.851e-34
Identity = 71/161 (44.10%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY D   S +  ++ARGF+ G  +A  +    V  RK  KLP +V+SE Y  EYG+  +E+H  ++  G+  ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G + L +
Sbjct:    6 SNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGSKRLND 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACGA (Adenine phosphoribosyltransferase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.851e-34
Identity = 75/151 (49.67%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            I  + DFP  GI+F+DIT +L D K +R       E  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV S  Y LEYG +V+EMH  A++ G++ +I DDL+AT GTL A   L+E +G  VV  A  IEL +LKGRE
Sbjct:    9 IASVKDFPNKGIIFRDITPILQDGKLYRAATHELAEYAKSRGAEVIVGPEARGFIVGCPVATELGIGFVPARKPHKLPREVESASYDLEYGSNVLEMHKDAIKPGQKVVICDDLMATAGTLHATKELIENLGGEVVGAAFYIELTDLKGRE 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_XANC5 (Adenine phosphoribosyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=apt PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33
Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = 3
Query:  228 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            S  IR I DFPK GI+F+DIT LL D   F   +D   + ++   +  V GIEARGFI G  +A  +   FVP+RKP KLPG  + +EY+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + VV  A ++EL  L+GR+
Sbjct:   19 SERIRDIADFPKQGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQVLQGRQ 172          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SYNJA (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=apt PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTID-LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR++PDFPKPGI+F+DIT LL D   FR  I+ L        ++  V GIE+RGFI G  +A  +G  FVP+RKP KLP  V+S+ YSLEYG+D +++H  A++ G+R +IVDD++ATGGT +A  +L+ + G  V   A +IEL  L GR+ L
Sbjct:    7 IRLVPDFPKPGILFRDITPLLRDPAGFRAAIEQLAAGTATMGSLDYVVGIESRGFILGAALAQHLGLGFVPVRKPGKLPPPVLSQSYSLEYGQDQLQLHAHALRPGDRVVIVDDVIATGGTAAATAQLVAQSGAEVGGFAFLIELAFLSGRKLL 160          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOPH (Adenine phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=apt PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +R IPDFP+ GI+F+D+T++L D  + + +ID   E     +  V+ G E+RGFIFG PIA  +   F+P+RK  KLP E +  EY+LEYG   +EMH  +++ G++ +I+DDL+ATGGT+ A  +L+E++G  VV+   ++EL  L GRE L
Sbjct:    8 VRSIPDFPEEGIIFRDVTSVLQDKDSLKMSIDQMQENLNGLDFDVIVGPESRGFIFGVPIAYNLNKAFIPVRKKGKLPCETVEMEYALEYGTATIEMHKDSIKPGQKVVIIDDLIATGGTIEAITKLIEQLGGEVVKIVFLMELEGLMGREKL 160          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT2_METVS (Adenine phosphoribosyltransferase 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=apt2 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33
Identity = 70/153 (45.75%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            IR+I DFPK GI F+D+T +L D K+ + T     +  +DKNI V+ G EARGF+FG  +A  +   FVP+RKP KLP +  S +Y+LEYG D +E+H  +++ G+   +VDDL+ATGGT+    +L+E++G +V   + VIEL  L GR+ L
Sbjct:    7 IRIIDDFPKKGISFKDVTPILKDPKSMKHTTKEITKYLEDKNIDVIVGPEARGFLFGILVAQELDLGFVPVRKPGKLPFKTFSVDYALEYGLDRLEIHSDSIEKGQNVAVVDDLLATGGTVLGVTKLVEKIGGNVSALSFVIELTNLNGRDKL 159          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_GRAFK5.775e-3444.58Adenine phosphoribosyltransferase OS=Gramella fors... [more]
APT_COPPD5.775e-3444.17Adenine phosphoribosyltransferase OS=Coprothermoba... [more]
APT_STRMU7.542e-3445.86Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_HUMAN7.542e-3442.77Adenine phosphoribosyltransferase OS=Homo sapiens ... [more]
APT_PSEU29.851e-3444.10Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_LACGA9.851e-3449.67Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_XANC51.287e-3348.70Adenine phosphoribosyltransferase OS=Xanthomonas c... [more]
APT_SYNJA1.287e-3348.70Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_CLOPH1.287e-3344.44Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT2_METVS1.287e-3345.75Adenine phosphoribosyltransferase 2 OS=Methanococc... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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