FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SPHAL (Adenine phosphoribosyltransferase OS=Sphingopyxis alaskensis GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLG 698
            ++S +R IPDFP+PGI F+DITTL+ D   F +++             ++  +EARGF+FG  +A A+G   VP+RK  KLPG  I  +Y LEYG D +E+H GAV  G R ++VDDL+ATGGT+ A   L+  VG  V     VI+LP+L G   LG
Sbjct:   12 LASLVRTIPDFPRPGIQFRDITTLIGDAVGFAESVRRLSACAAAYRPDLIVAVEARGFLFGAAMATAMGLGVVPVRKAGKLPGVTIGVDYELEYGTDRLELHEGAVLPGHRVVLVDDLLATGGTILATAALMRSVGAEVAAALFVIDLPDLGGSARLG 169          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_PSESM (Adenine phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 71/161 (44.10%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            +   S IR + DFPKPG++F+DIT L    KA R  ID FV+RY D + S +  ++ARGF+ G  +A  +    V  RK  KLP +V+SE Y  EYG+  +E+H  ++  G   ++ DDL+ATGGTL AA  L+ R+G  V E A +I+LPEL G + L +
Sbjct:    6 SNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDADFSHIGVMDARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGNSVIMFDDLIATGGTLIAAANLIRRMGAQVHEAAAIIDLPELGGSKRLND 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACJO (Adenine phosphoribosyltransferase OS=Lactobacillus johnsonii GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 689
            I  + DFP  GI+F+DIT +L D K +R       +  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV S  Y LEYG +V+EMH  A++ G++ +I DDL+AT GTL A   L+E +G  VV  A  IEL +LKGRE
Sbjct:    9 IASVQDFPNKGIVFRDITPILQDGKLYRAATHELADYAKSRGAEVIVGPEARGFIVGCPVATELGVGFVPARKPHKLPREVESASYDLEYGSNVLEMHKDAIKPGQKVVICDDLMATAGTLHATKELIENLGGEVVGAAFYIELTDLKGRE 159          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACBA (Adenine phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I  +PD+P+ GIMF+DI+ L+ D +AF    D  V   KDK++ +V G EARGFI G P+A  +G  F P RK  KLP E +   Y LEYG+  + +H  A++ G++ L+ DDL+ATGGT+ A I+L+E +G  VV  A +IEL +L GR+ L
Sbjct:    9 IASVPDYPEKGIMFRDISPLMADGQAFHAATDEIVAYAKDKDVEMVVGPEARGFIVGCPVAYEMGIGFAPARKEGKLPRETVKASYDLEYGQSALYLHKDAIKPGQKVLVTDDLLATGGTIGATIQLVEDLGGIVVGTAFLIELQDLHGRDKL 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_HELHP (Adenine phosphoribosyltransferase OS=Helicobacter hepaticus GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 71/159 (44.65%), Postives = 111/159 (69.81%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERA--LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I+ +IR + ++ KPG++F+DITTL+ D + F++ I++   RY++++I  +A IEARGFIFG  +A A+G  FVP+RK  KLP   ISE+Y+LEYG D + +H  A +  + A  +++DDL+ATGGT  A+++L++ +G   VE A VI L  L+G + L
Sbjct:    6 IADSIRAVYNY-KPGVIFRDITTLIGDAEVFKEVINILRSRYENQSIDFIAAIEARGFIFGSALAYALGIGFVPIRKKGKLPYNTISEKYTLEYGTDELHIHTDAFRDKKNAKVVLIDDLIATGGTAEASVKLIKSIGAQCVEAAFVINLKGLEGEKKL 163          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CLOCE (Adenine phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVE-RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +   +R + DFPK GI F DITT+L D +AFR+ ++ F     K  +  ++ G E+RGFIFG P+A  +   FVP+RK  KLP + + EEY LEYGKD +E+H  A+  GE+ LIVDDL+ATGGT  A I+L+E++G  V      IEL  LKGR+ L
Sbjct:    3 LKDKLRHVMDFPKEGIDFIDITTVLQDPEAFRECMESFKTLAEKMGDFDLIVGSESRGFIFGAPLAYRMEKGFVPVRKKGKLPYKTVREEYDLEYGKDELEIHSDAIAPGEKVLIVDDLLATGGTTEANIKLVEKLGGEVTGIVYFIELMSLKGRDKL 160          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMJE (Adenine phosphoribosyltransferase OS=Campylobacter jejuni GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33
Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   +I L +L G   L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLINLKDLNGANKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_YARLI (Adenine phosphoribosyltransferase OS=Yarrowia lipolytica GN=APT1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33
Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFV----ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            + + +R   DFP  GI+F+DI  +  D K+F+  ID F     + + DK I V+ G++ARGF+FGP +ALAIGA FVP+RK  KLPG+ +  E+  EYGKDV E+   A++ G+  ++VDD++ATGG+ + A  L+ ++   V+E   ++EL  LKGR+ L
Sbjct:   10 LKAKLRQYQDFPSKGIVFEDILPIFQDPKSFQQLIDAFKLHIKDTFGDKKIDVIVGLDARGFLFGPTLALAIGAAFVPVRKQGKLPGKTVHAEFQKEYGKDVFEIQEDAIKPGQTVIVVDDIIATGGSAACAGDLVTKLKGEVLEFIFILELLFLKGRDKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACAC (Adenine phosphoribosyltransferase OS=Lactobacillus acidophilus GN=apt PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  228 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            S  I  + DFP  GI+F+DIT +L + + +R       E  K +N  V+ G EARGFI G P+A  +G  FVP RKP KLP EV    Y LEYG + +EMH  A++ G+R ++ DDL+AT GTL A+  L+E +G  +V  A  IELP+LKGRE L
Sbjct:    6 SKYIASVQDFPNKGIVFRDITPILQNGELYRAATHELAEYAKSRNADVIVGPEARGFIVGCPVATELGLGFVPARKPHKLPREVERASYDLEYGSNSLEMHKDAIKPGQRVVLCDDLMATAGTLRASKELIENLGGKLVGAAFYIELPDLKGREKL 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_EXIS2 (Adenine phosphoribosyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=apt PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33
Identity = 70/153 (45.75%), Postives = 104/153 (67.97%), Query Frame = 3
Query:  237 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            I+ + ++PK GI F+DIT+L+ +  A++ ++D  ++  + +   V+AG EARGF+ G P A A+   FVP+RK  KLP E +  EY LEYGKDV+ MH  A+Q G+R +I+DDL+ATGGT+ A I+++E++G  V     +IEL  L GRE L
Sbjct:    7 IKEVENWPKEGISFKDITSLMQNGPAYKQSVDALIDYARKQGADVIAGPEARGFVVGCPAAYAMEIGFVPVRKEGKLPRETVRVEYGLEYGKDVLTMHHDAIQPGQRVVILDDLLATGGTIEATIKMIEQLGGTVAGIGFLIELDGLGGREKL 159          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SPHAL1.680e-3345.57Adenine phosphoribosyltransferase OS=Sphingopyxis ... [more]
APT_PSESM1.680e-3344.10Adenine phosphoribosyltransferase OS=Pseudomonas s... [more]
APT_LACJO1.680e-3349.01Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_LACBA1.680e-3346.41Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_HELHP1.680e-3344.65Adenine phosphoribosyltransferase OS=Helicobacter ... [more]
APT_CLOCE1.680e-3348.10Adenine phosphoribosyltransferase OS=Clostridium c... [more]
APT_CAMJE1.680e-3348.08Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_YARLI2.195e-3343.48Adenine phosphoribosyltransferase OS=Yarrowia lipo... [more]
APT_LACAC2.195e-3347.44Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_EXIS22.195e-3345.75Adenine phosphoribosyltransferase OS=Exiguobacteri... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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