FC930219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y++AQCLGAI G G + Sbjct: 23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL 133
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL 133
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.850e-12 Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 214 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC 519 +A +AEFIA I + T N G++ IA A +F+ V A SGGH+NPAVTFGL +G ++++ L Y VAQ LGA C Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAFGQLT----NGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVAC 116 HSP 2 Score: 29.261 bits (64), Expect = 3.850e-12 Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 3 Query: 606 GLGAEIIGTFVLVYTVF-SATDPKRSARDSHVP 701 G+ EI+ TF LVYTV+ +A DPK+ + + P Sbjct: 142 GVVFEIVITFALVYTVYATAADPKKGSLGTIAP 174
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 3.850e-12 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 1 Query: 214 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK 531 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK 120 HSP 2 Score: 30.0314 bits (66), Expect = 3.850e-12 Identity = 16/33 (48.48%), Postives = 22/33 (66.67%), Query Frame = 3 Query: 606 GLGAEIIGTFVLVYTVF-SATDPKRSARDSHVP 701 G+ EII TF LVYTV+ +A DPK+ + + P Sbjct: 142 GVVMEIIITFALVYTVYATAADPKKGSLGTIAP 174
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.850e-12 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 1 Query: 214 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK 531 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK 120 HSP 2 Score: 30.0314 bits (66), Expect = 3.850e-12 Identity = 16/33 (48.48%), Postives = 22/33 (66.67%), Query Frame = 3 Query: 606 GLGAEIIGTFVLVYTVF-SATDPKRSARDSHVP 701 G+ EII TF LVYTV+ +A DPK+ + + P Sbjct: 142 GVVMEIIITFALVYTVYATAADPKKGSLGTIAP 174
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL 133
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + Sbjct: 26 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL 136
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 190 ELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 516 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA+ YMVAQ LGA+ G Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAG 100
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 175 LIDFEELGRWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL 133
BLAST of FC930219 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.092e-11 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 205 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 528 +F +AV AEF+A + + S +L I+ AFG I + +SGGH+NPA+T L +G ++SL+RA+ Y+VAQ +GAI G + Sbjct: 9 AFLKAVFAEFLATLIFVFFGLGSALKWPSAMP-----------SVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAIL 105 HSP 2 Score: 26.9498 bits (58), Expect = 1.092e-11 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 600 GTGLGAEIIGTFVLVYTVFSATDPKRSA 683 G + AE+I TF L VFS+TD +R++ Sbjct: 129 GQAVVAEMILTFQLALCVFSSTDSRRTS 156 The following BLAST results are available for this feature:
BLAST of FC930219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930219 ID=FC930219; Name=FC930219; organism=Citrus clementina; type=EST; length=702bpback to top |