FC930244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 295 LTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEG-DKSQDEIDFEFLG---KDKTIVQTNYYTTGT--GNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 LT D GA S ++ YG FS+ ++ P G SG+ YLS+ E KS DEID E LG +D +QTN Y G+ REE FD ++ FH+Y + W +L+D Sbjct: 65 LTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVD 179
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKS-QDEIDFEFL----GKDKTIVQTNYYTTGTGN-----REEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 D N++T+ D G+ ++S F G F + I+ G T+G+ ++YLS+ E DE+D EFL GK T+ QTN Y G+G+ RE L FD ++ FH Y I W P I +L+D Sbjct: 59 DQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTL-QTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVD 182
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 48/123 (39.02%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 277 DSNSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGD---KSQDEIDFEFLGK---DKTIVQTNYYTTGTGN--REEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 D S+ L D G+ + S++ + +G FSSLI+ P T+G+ Y S+ GD K DE+D EFLG QTN Y G+ N REE + L FD S+ FH Y I W P I + +D Sbjct: 58 DDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSN--GDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVD 178
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 283 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + I L D G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD ++ +H Y I W I + +D Sbjct: 53 SDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE--HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVD 166
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 283 NSITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + I L D G ++S +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN +T G G+RE+ L FD + +H Y + W I + +D Sbjct: 51 SEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAE--HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVD 164
BLAST of FC930244 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 289 ITLTFDHRGGARWRSTTRFLYGTFSSLIQCPKGNTSGLNFNIYLSSLEGDKSQDEIDFEFLGK---DKTIVQTNYYTTGTGNREEIHDLGFDCSEGFHEYVIKWGPDLIQWLID 621 + L+ D G +++ +L+G FS I+ G+++G YLSS + DEIDFEFLG I+QTN ++ G G+RE+ L FD ++ +H Y + W +I + +D Sbjct: 54 VQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE--HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVD 165 The following BLAST results are available for this feature:
BLAST of FC930244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930244 ID=FC930244; Name=FC930244; organism=Citrus clementina; type=EST; length=624bpback to top |