FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 M K+K+ INGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + +++ KDD ++ G + VRNP E+PW + GA+YVVESTG+FT VIISAP+KD Sbjct: 1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKD 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 M K+K+ INGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + +++ KDD ++ G + VRNP E+PW + GA+YVVESTG+FT VIISAP+KD Sbjct: 1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKD 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23 Identity = 63/135 (46.67%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +KI INGFGRIGR+V R I D+E+VA+ND + DY+ YM KYDSVHG++ E+ V D TL+ K + + V++P E+ W E GA+ VVESTG+F VI+SAPSK D PMF G Sbjct: 3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYG 134
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23 Identity = 56/109 (51.38%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 156 VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFCCG 482 V+++AV+DPFI YM YMFKYDSVHG++K +++KD K ++ G P+TVF R+P I W GA+YVVES+GVFT VIISAPS DAPMF G Sbjct: 6 VKVLAVSDPFIDLQYMVYMFKYDSVHGRFKG-TVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVG 112
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 M V INGFGRIGRLVAR++++ + +L+ VN T DYM Y FKYDS+HG+++ ++ V D ++ G++ +T R+P++I WA+TG EY+ ESTGVF VI SAP+KD Sbjct: 46 MQAVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQ-GDVVVDGDDLVIDGQRVITT-RARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKD 172
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22 Identity = 58/136 (42.65%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFCCG 482 +KI INGFGRIGRLVAR+ + V LV +ND + + Y+FKYDS HG + V ++ ++ ++ + F RNP ++PW + GA+YVVESTG+FT VIISAPSKD P F G Sbjct: 2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSYGG--TVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVG 134
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKG 133 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |