FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.653e-21 Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.653e-21 Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +K+ INGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.077e-21 Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 +++ INGFGRIGRLV R +L + ++E+VAVND D + ++ KYDS HG++K + V D TL+ +K V VF ++P +PWAE + VVESTG F VIISAP+K Sbjct: 8 IRVAINGFGRIGRLVFRALLSQKNIEIVAVND-LTHPDTLAHLLKYDSAHGEFK--KKVVAKDNTLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISAPAK 129
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.937e-21 Identity = 50/134 (37.31%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +K+ INGFGRIGR++ R+ +R D+E++A+ND + +Y+ YM KYDS HG +K H KD+ ++ K + V +++PE++ W + + V+ESTG+F V+++ PSK D PMF G Sbjct: 3 IKVGINGFGRIGRVLFRLAQKRSDIEIIAIND-LLAPEYIAYMLKYDSTHGVFKKHITFDKDN--IIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKDDIPMFVRG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFCCG 482 +KI INGFGRIGR+V R RDD+E+V +ND I +YM YM KYDS HG++ ++VKD ++ G K + V R+P + W G + VE+TG+F V+++ PSKDA PMF G Sbjct: 3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRF-DGTVEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.939e-20 Identity = 51/134 (38.06%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +KI INGFGRIGR++ R+ +R+++E+VA+ND + Y+ YM KYDS HG +K +++VK++ ++ G+K + + +++PE++ W + + V+ESTG+F V+I+ PSK D PMF G Sbjct: 3 IKIGINGFGRIGRVLFRLAQERENIEVVAIND-LLDPKYIAYMLKYDSTHGNFK-KDIEVKNNNLIINGKK-IRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 6.719e-20 Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 96 INGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 INGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 1 INGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRG 127
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 8.776e-20 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +++ INGFGRIGR+V R +R+D+E+V +ND + DYM YM KYDS HG+++ ++V+ ++ G+K + V R+P + W E + VVESTG+F V+I+ PSK D PMF G Sbjct: 3 IRVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFE-GAVEVQGGALVVNGKK-IRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMG 133
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.497e-19 Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +K+ INGFGRIGRLV R IL+R+ VE++A+ND + D +TY+FK+DS HG++ +++ + D L+ G++ + RN + +PW + G + V+E TG+FT V+ISAP K D P F G Sbjct: 1 MKVVINGFGRIGRLVLRQILKRNSSVEVLAIND-LVPGDALTYLFKFDSTHGRFP-EDVRCEADH-LIVGKRKIQFLSERNVQNLPWKDLGVDLVIECTGLFTKKEDAEKHIQAGAKRVLISAPGKGDIPTFVMG 132 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |