FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.186e-16 Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 VK+ INGFGRIGR V R L +VE+VAVND + + ++ +YDSVHG+ E+ V D L+ K + V R+P ++ W + G E VVESTG FT VIISAP+ + Sbjct: 3 VKVGINGFGRIGRNVFRAALNNPEVEVVAVND-LTDANMLAHLLQYDSVHGKLDA-EVSV-DGNNLVVNGKTIEVSAERDPAKLSWGKQGVEIVVESTGFFTKRADAAKHLEAGAKKVIISAPANE 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.640e-16 Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 +++ INGFGRIGR AR L R++ +ELVAVND T+D T ++ KYDS+ G+ K+ ++ DD ++ K + RNPE +PW E + ++ESTGVFT V+I+AP K+ Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVND---TSDPRTNAHLLKYDSMLGKLKNVDITA-DDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKN 127 HSP 2 Score: 22.3274 bits (46), Expect = 1.640e-16 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 472 FVVGVNEHEY 501 FV+GVN H+Y Sbjct: 132 FVIGVNHHDY 141
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.642e-16 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFCCG 482 + K+K+ INGFGRIGR R R D +++V VND T++ KYDS+ G +K ++K+ D++T KP+ V R+P ++PWAE G + V+E TGVF VII+AP+K D P + G Sbjct: 82 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKS-ATHLLKYDSILGTFKA-DVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVG 219
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.451e-16 Identity = 52/140 (37.14%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFCCG 482 + K+K+ INGFGRIGR R R D +E++ VND + +++ KYDS+ G +K E+K+ +++T+ KP+ V R+P ++PWAE G + V+E TGVF VII+AP+K D P + G Sbjct: 83 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKN-ASHLLKYDSMLGTFKA-EVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIG 220
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.451e-16 Identity = 43/127 (33.86%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 KVK+ INGFGRIGR+V R + D +++VA+N + + + + ++ KYD++HG++ + +D +L+ K V + R+P+++PW E + VVE+TG F VI++AP K+ Sbjct: 2 KVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASY-SAETLAHLIKYDTIHGRYDKEVVAGED--SLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAKKVILTAPGKN 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.736e-15 Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 +++ INGFGRIGR AR L R++ +ELVAVND T+D T ++ KYDS+ G+ K+ ++ DD ++ K + RNPE +PW E + ++E+TGVF V+I+AP K+ Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVND---TSDPRTNAHLLKYDSMLGKLKNVDITA-DDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFVSKEGATKHINAGAKKVLITAPGKN 127 HSP 2 Score: 21.9422 bits (45), Expect = 1.736e-15 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 472 FVVGVNEHEYKPEL 513 FV+GVN H+Y L Sbjct: 132 FVMGVNHHDYDHNL 145
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.912e-15 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFCCG 482 + K+K+ INGFGRIGR R R D +++V VND + +++ KYDS+ G +K ++K+ D++T+ K + V R+P ++PWAE G + V+E TGVF VII+AP+K D P + G Sbjct: 52 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSMLGTFKA-DVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVG 189 HSP 2 Score: 21.9422 bits (45), Expect = 2.912e-15 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 472 FVVGVNEHEYKPEL 513 +VVGVNE +Y E+ Sbjct: 186 YVVGVNEQDYSHEV 199
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 2.921e-15 Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 +K+ INGFGRIGR V R++ R VE+ +ND TD T ++ KYDS++ ++ DD+ L K + V++P+EIPWAE G V+ESTGVFT VII+AP+K Sbjct: 1 MKVGINGFGRIGRQVFRILHSRG-VEVALIND---LTDNKTLAHLLKYDSIYHRFPGEV--AYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK 121
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.815e-15 Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 75 MGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFCCG 482 + K+K+ INGFGRIGR R R D +E+V +ND + +++ KYDS+ G +K E+K+ D++T+ K + V R+P ++PWAE G + V+E TGVF VII+AP+K D P + G Sbjct: 79 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKN-ASHLLKYDSMLGTFKA-EVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVIITAPAKGADIPTYVMG 216
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.983e-15 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 V++ INGFGRIGR R +L + DV++VA+ND + Y+ K+DS+ G+ H ++ ++++ T++ G + + VR P +PW G + VVESTG+FT VI+SAP+ D Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEHGIADVQVVAIND-ITDNSTLAYLLKFDSILGRLPH-DVSLEEEDTIVVGSEKIKALAVREGPAALPWHAFGVDVVVESTGLFTNAAKAKGHLEAGAKKVIVSAPATD 132 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |