FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14 Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 VK+ INGFGRIGRL AR IL R D +ELV +ND + + ++FK DS HG + +D ++ K + V R+P +P + G + V+E TG+FT V+ISAP+K Sbjct: 3 VKVAINGFGRIGRLAARAILSRPDSGLELVTIND-LGSVEGNAFLFKRDSAHGTYPGTVTTEGND--MVIDGKKIVVTAERDPANLPHKKLGVDIVMECTGIFTNTEKASAHLTAGAKKVLISAPAK 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.230e-14 Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVIL----QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET-GAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VKI INGFGRIGRL R I+ + D+E+VA+ND T + ++ KYDS HG + HE+ +D ++ G+K V+ + IPW + G ++V+E TG +T V+ISAP+ Sbjct: 3 VKIGINGFGRIGRLAFRRIMDLGEETKDIEVVAIND-LTTPAMLAHLLKYDSTHGTF-DHEVSATEDSLVVDGKK-YRVYAEPQAQNIPWVKNDGVDFVLECTGFYTSKAKSQAHLDAGAKRVLISAPA 128
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_SEROD (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia odorifera GN=gap PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.219e-14 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+ + V ++P + W E G + V E+TG+F V+++ PSK D PMF G Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGSVEVKDGHLVVNGQT-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 V++ INGFGRIGR R +L + D+E+VAVND + ++ K+DS+ G+ + ++ ++ + T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADIEVVAVND-ITDNSTLAHLLKFDSILGRLPY-DVSLEGEDTIVVGPAKIKALEVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATD 132
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_ESCHE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia hermannii GN=gap PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.398e-14 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 +V R R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V ++P + W E G + V E+TG+F V+++ PSK D PMF G Sbjct: 1 IVFRAAQTRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDDTPMFVKG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 V++ INGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATD 132
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 V++ INGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATD 132
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 386 VK+ INGFGRIGRL R I + + VE+ +ND + ++ KYD+ G++K ++VK+D + G K V V RNPE+I WA++G E V+E+TG F Sbjct: 3 VKVGINGFGRIGRLALRRIQEVEGVEVAHIND-LTDPAMLAHLLKYDTTQGRFK-GTVEVKEDGFDVNG-KFVKVTAERNPEDIQWADSGVEIVLEATGFF 100
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 V+I INGFGRIGR V R R ++E+VAVND M ++ YDS+ G++ E + + G++ + V R+P +PW + G + V+ESTG+FT VII+AP+ Sbjct: 3 VRIGINGFGRIGRNVFRAAAARSSELEIVAVND-LGDVPTMAHLLAYDSILGRFP--EEVTAEPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHVDGGAKKVIIAAPA 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.252e-13 Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS--KDAPMFCCG 482 K+++ INGFGRIGR R R + +++VA+ND +++ KYDS G + ++K+ DD + K + + R+P ++PW E + V+E TGVF V+I+AP+ KD P F G Sbjct: 37 KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSG-GVKQASHLLKYDSTLGTFAA-DVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAPAKDKDIPTFVVG 172 HSP 2 Score: 23.8682 bits (50), Expect = 3.252e-13 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 472 FVVGVNEHEYKPE 510 FVVGVNE +YK E Sbjct: 169 FVVGVNEGDYKHE 181 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |