FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 123 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFCCG 482 +V R +R D+E+V +ND + +YM YM KYDS HG++ ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKD PMF G Sbjct: 1 IVFRAAQKRSDIEIVGIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRG 118
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13 Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 87 KIRINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 K+ INGFGRIGRLV R +L+ + ++++VA+ND + + Y+ K+DS +G + +D +L+ K + V+ + + IPW GAE +VE TG +T V+ISAP+ Sbjct: 3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 87 KIRINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA 464 +I INGFGRIGR V R +L+RD D+++VAVND + + YD+ G+ + V+ + ++ G + +TV R P +PWAE G + V+E+TG FT V++SAP+ A Sbjct: 3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSGRLGR-PVTVEGNVLVVDGRR-ITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGA 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12 Identity = 46/140 (32.86%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 72 IMGKVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 + K+K+ INGFGRIGR R R D +++V +ND +++ KYDS+ G + ++K D + K + V RNP +PW + G + V+E TGVF V+I+AP K D P + G Sbjct: 63 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDA-DVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVG 200
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 KV++ INGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ G P++ P+++PW + G + V+E +G F VI++AP K+ Sbjct: 2 KVRVGINGFGRMGRLALRAAWDWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLIDG-TPLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKE 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |