FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 90 IRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 I ING GRIGR+V R+ LQ ++ +VA+N + + + ++ YD+ HG+ + LKV+ + L G+ + + RNPE +PW E + +++TG F V+++ PSK Sbjct: 5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSK 124
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.557e-12 Identity = 47/138 (34.06%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD---VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K D + K + V RNP +PW E G + V+E TGVF V+I+AP K D P + G Sbjct: 67 KLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVG 202 HSP 2 Score: 21.1718 bits (43), Expect = 1.557e-12 Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 472 FVVGVNEHEYKPE 510 +VVGVN +Y P+ Sbjct: 199 YVVGVNADQYNPD 211
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=epd PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12 Identity = 38/127 (29.92%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + NP +PW E + V E+TGV V+IS PS Sbjct: 2 IRVAINGYGRIGRSILRAVYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DEQHMIIGDDAIKLLHEPNPANLPWQEMDIDIVFEATGVINDRQACEAHIEAGARQVLISHPS 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12 Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 87 KIRINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 K+ INGFGRIGRLV R++ + ++++VA+ND + + Y+ K+DS +G + +D +L+ K + V+ + + IPW GAE +VE TG +T V+ISAP+ Sbjct: 3 KVGINGFGRIGRLVLGRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_SHEHH (D-erythrose-4-phosphate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=epd PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12 Identity = 38/129 (29.46%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + NP +PW E + V E+TGV V+IS PS + Sbjct: 2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPNPANLPWKELDIDIVYEATGVINDRQECEAHLKAGAKQVLISHPSSN 127
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12 Identity = 37/104 (35.58%), Postives = 69/104 (66.35%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ--RD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 386 +KI ING+GRIGR V R + + RD ++++VA+N+ + M ++ ++D+ HG++ HH +++ + ++L GE +++F R+P +PW G + V++ TGVF Sbjct: 2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE-LAAPEAMVHLTRFDTSHGRF-HHPVQLAGN-SMLVGEDLISLFAERDPSRLPWRALGVDVVLDCTGVF 102
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.948e-12 Identity = 38/127 (29.92%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD 461 K+++ INGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ P++ PE++PW + G + V+E +G F VI++AP K+ Sbjct: 2 KIRVGINGFGRMGRLALRAAWGWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLI-DSTPLSFSEYGKPEDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKE 126
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 4.453e-12 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 87 KIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 ++ INGFGRIGR R L R D +E+V +ND T+D T ++ +YDS+ G K D+ ++ K + RNP +PWAE + V+E+TGVF V+I+AP K Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGIND---TSDPRTNAHLLRYDSMLG--KLDADISADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGK 125 HSP 2 Score: 25.409 bits (54), Expect = 4.453e-12 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 472 FVVGVNEHEYKPE 510 +VVGVN HEYK E Sbjct: 132 YVVGVNAHEYKHE 144
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFCCG 482 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K + + K + V RNP +PW E G + V+E TGVF VII+AP K D P + G Sbjct: 61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVG 195
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |