FC930275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.157e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 123
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-12 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 99 NGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFCCG 482 NGFGRIGR R + R + +E++A+ND +++ KYDS G++ ++K+ DD + K + V R+P ++PW E + V+E TGVF V+I+AP+K D P + G Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVG 130 HSP 2 Score: 23.0978 bits (48), Expect = 5.794e-12 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 472 FVVGVNEHEYK 504 +VVGVN H+YK Sbjct: 127 YVVGVNAHDYK 137
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 39/104 (37.50%), Postives = 68/104 (65.38%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT 389 +K+ INGFGRIGR V ++ +R +++VA+ND TD T ++ KYDS G + + +++ +D ++ G + + + R+P+ +PWA+ G + V+ESTGVF+ Sbjct: 1 MKLAINGFGRIGRNVFKIAFERG-IDIVAIND---LTDPKTLAHLLKYDSTFGVY-NKKVESRDGAIVVDGRE-IKIIAERDPKNLPWAKLGIDVVIESTGVFS 98
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.796e-12 Identity = 37/127 (29.13%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 84 VKIRINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS 455 +++ ING+GRIGR + R + + RD +++VA+N+ + M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + +P ++PW E + V E+TGV V+IS PS Sbjct: 2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPS 125
BLAST of FC930275 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.680e-12 Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 81 KVKIRINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK 458 KV++ INGFGRIGR R R D +++V +ND T+ T ++ KYDS+ G + + +D T+ K + V RNP E+PW E + VVE+TGVF V+I+AP K Sbjct: 80 KVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCIND---TSGVKTASHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGK 204 HSP 2 Score: 21.557 bits (44), Expect = 9.680e-12 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 472 FVVGVNEHEY 501 FVVGVN+H Y Sbjct: 211 FVVGVNDHLY 220 The following BLAST results are available for this feature:
BLAST of FC930275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930275 ID=FC930275; Name=FC930275; organism=Citrus clementina; type=EST; length=513bpback to top |