FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 5.768e-27 Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 512 +KIGINGFGRIGR+V R I D+E+VA+ND + DY+ YM KYDSVHG++ E+ V D TL+ K + + V++P E+ W E GA+ VVESTG+F VI+SAPSK D PMFV GVN YK E Sbjct: 3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYKGE 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.739e-26 Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNEHEYKPE 512 +KIGINGFGRIGRLVAR+ + V LV +ND + + Y+FKYDS HG + V ++ ++ ++ + F RNP ++PW + GA+YVVESTG+FT VIISAPSKD P FVVGVN Y + Sbjct: 2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSYGG--TVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNAD 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.329e-26 Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYK 506 M V GINGFGRIGRLVAR++++ + +L+ VN T DYM Y FKYDS+HG+++ ++ V D ++ G++ +T R+P++I WA+TG EY+ ESTGVF VI SAP+KD + VV GVN +YK Sbjct: 46 MQAVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQ-GDVVVDGDDLVIDGQRVITT-RARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYK 187
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.423e-25 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 159 VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503 V+++AV+DPFI YM YMFKYDSVHG++K +++KD K ++ G P+TVF R+P I W GA+YVVES+GVFT VIISAPS DAPMFVVGVN Y Sbjct: 6 VKVLAVSDPFIDLQYMVYMFKYDSVHGRFKG-TVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 114.39 bits (285), Expect = 3.165e-25 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNEHEYKP 509 M K+K+GINGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + +++ KDD ++ G + VRNP E+PW + GA+YVVESTG+FT VIISAP+KD +VGVN + P Sbjct: 1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDP 144
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 3.165e-25 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNEHEYKP 509 M K+K+GINGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + +++ KDD ++ G + VRNP E+PW + GA+YVVESTG+FT VIISAP+KD +VGVN + P Sbjct: 1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDP 144
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 512 +K+GINGFGRIGR++ R+ +R D+E++A+ND + +Y+ YM KYDS HG +K H KD+ ++ K + V +++PE++ W + + V+ESTG+F V+++ PSK D PMFV G N H+Y+ E Sbjct: 3 IKVGINGFGRIGRVLFRLAQKRSDIEIIAIND-LLAPEYIAYMLKYDSTHGVFKKHITFDKDN--IIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKDDIPMFVRGANFHKYQGE 142
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.679e-24 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 4.570e-24 Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVI----LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKP 509 +K+GINGFGRIGR+V + + L +++++VAV D Y Y KYDSVHG++KH K DD ++ G + + V RNP ++PW + G EYV+ESTG+FT V+ISAP S A FV+GVN + Y P Sbjct: 3 IKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNP 155
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 4.570e-24 Identity = 60/143 (41.96%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 512 +++GINGFGRIGR+V R +R+D+E+V +ND + DYM YM KYDS HG+++ ++V+ ++ G+K + V R+P + W E + VVESTG+F V+I+ PSK D PMFV+GVN YK E Sbjct: 3 IRVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFE-GAVEVQGGALVVNGKK-IRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKGE 142 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |