FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 506 +K+GINGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 506 +K+GINGFGRIGR+V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +K+GINGFGRIGR+V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.796e-24 Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 503 +KIGINGFGRIGR+V R RDD+E+V +ND I +YM YM KYDS HG++ ++VKD ++ G K + V R+P + W G + VE+TG+F V+++ PSKDA PMFV GVN + Y Sbjct: 3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRF-DGTVEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGVNFNAY 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PG_TRYCR (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.796e-24 Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVI----LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKP 509 +K+GINGFGRIGR+V + + L ++++VAV D +Y Y +YD+VHG++K+ K DD ++ G + + V RNP ++PW + G EYV+ESTG+FT V+ISAP S A V+GVN HEY P Sbjct: 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNP 155
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.018e-23 Identity = 57/143 (39.86%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 512 +KIGINGFGRIGR++ R+ +R+++E+VA+ND + Y+ YM KYDS HG +K +++VK++ ++ G+K + + +++PE++ W + + V+ESTG+F V+I+ PSK D PMFV G N +YK E Sbjct: 3 IKIGINGFGRIGRVLFRLAQERENIEVVAIND-LLDPKYIAYMLKYDSTHGNFK-KDIEVKNNNLIINGKK-IRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRGANFDKYKGE 142
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.268e-23 Identity = 58/143 (40.56%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYKPE 512 +K+GINGFGRIGR R R+++E+VA+ND ++ ++ KYDSVHG +K ++ KDD ++ G K + VF ++P +IPW + G + V+E+TGVF VII+AP+K+ + VV GVNE +Y P+ Sbjct: 3 IKVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFK-GSVEAKDDSIVVDG-KEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPK 142 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |