FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.521e-19 Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPEL 515 + K+K+ INGFGRIGR R R D +++V VND + +++ KYDS+ G +K ++K+ D++T+ K + V R+P ++PWAE G + V+E TGVF VII+AP+K D P +VVGVNE +Y E+ Sbjct: 52 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSMLGTFKA-DVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYSHEV 199
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.987e-19 Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYKPE 512 VK+ INGFGRIGR V R I++ R D+E+VA+ND + ++F++DSVHG++ E+KV D T+ G P+ V VRNP E+P E G + +E TG+FT V++SAP+ A + VV GVN + E Sbjct: 3 VKVAINGFGRIGRNVLRAIIESGRTDIEVVAIND-LGPVETNAHLFRFDSVHGRFPG-EVKVAGD-TIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNE 144
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 3.389e-19 Identity = 60/146 (41.10%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTY--MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKPE 512 +++GINGFGRIGR R +L+R DD+E+VAVND TD T + K+DS+ G+ E++ DD ++ G K + V+ R+P+ + WA + V+ESTG FT VIISAP S + FV GVN Y PE Sbjct: 3 IRVGINGFGRIGRNFFRAVLERSDDLEVVAVND---LTDNKTLSTLLKFDSIMGRLGQ-EVEYDDD-SITVGGKRIAVYAERDPKNLDWAAHNVDIVIESTGFFTDANAAKAHIEAGAKKVIISAPASNEDATFVYGVNHESYDPE 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19 Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 78 MGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEY 503 + K+K+ INGFGRIGR R R D +E+V +ND + +++ KYDS+ G +K E+K+ D++T+ K + V R+P ++PWAE G + V+E TGVF VII+AP+K D P +V+GVNE +Y Sbjct: 79 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKN-ASHLLKYDSMLGTFKA-EVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVIITAPAKGADIPTYVMGVNEQDY 222
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAP-MFVVGVNEHEYKPEL 515 +++ INGFGRIGR AR L R++ +ELVAVND T+D T ++ KYDS+ G+ K+ ++ DD ++ K + RNPE +PW E + ++E+TGVF V+I+AP K+ FV+GVN H+Y L Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVND---TSDPRTNAHLLKYDSMLGKLKNVDITA-DDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFVSKEGATKHINAGAKKVLITAPGKNEDGTFVMGVNHHDYDHNL 145
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.288e-18 Identity = 49/144 (34.03%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 512 KVK+ INGFGRIGR+V R + D +++VA+N + + + + ++ KYD++HG++ + +D +L+ K V + R+P+++PW E + VVE+TG F VI++AP K+ + V+GVNE ++ E Sbjct: 2 KVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASY-SAETLAHLIKYDTIHGRYDKEVVAGED--SLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAE 142
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.682e-18 Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVN 491 +K+ INGFGRIGRLV R +L + +VE+VA+ND + + ++ KYDS HG+ K ++ VK + L K V VF ++P+ +PW E + V+ESTG F VIISAP+K+ + V N Sbjct: 8 IKVAINGFGRIGRLVFRSLLSKANVEVVAIND-LTQPEVLAHLLKYDSAHGELK-RKITVKQN-ILQIDRKKVYVFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYN 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.197e-18 Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKP 509 +K+GINGFGRIGR V R++ R VE+ +ND TD T ++ KYDS++ ++ DD+ L K + V++P+EIPWAE G V+ESTGVFT VII+AP+K + V+GVN Y P Sbjct: 1 MKVGINGFGRIGRQVFRILHSRG-VEVALIND---LTDNKTLAHLLKYDSIYHRFPGEV--AYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDP 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.392e-18 Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEY 503 V++GINGFGRIGR R +L + DV++VA+ND + Y+ K+DS+ G+ H ++ ++++ T++ G + + VR P +PW G + VVESTG+FT VI+SAP+ D + +V GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEHGIADVQVVAIND-ITDNSTLAYLLKFDSILGRLPH-DVSLEEEDTIVVGSEKIKALAVREGPAALPWHAFGVDVVVESTGLFTNAAKAKGHLEAGAKKVIVSAPATDPDITIVFGVNDDKY 146
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.348e-18 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNEHE 500 K+ INGFGRIGRL R IL+ +E+VA+ND + ++FKYDS G++ + E++VK+ ++ G K V VF +PE++PW E G + V+E TG FT V+ISAP+ D V VN + Sbjct: 3 KVAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRF-NGEIEVKEGAFVVNG-KEVKVFAEADPEKLPWGELGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNED 137 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |