FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.424e-17 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNEHE 500 KI INGFGRIGRL R IL+ +E+VA+ND + ++FKYDS G++ + E++VK+ ++ G K V VF +PE++PW + G + V+E TG FT V+ISAP+ D V VN + Sbjct: 3 KIAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRF-NGEIEVKEGAFVVNG-KEVKVFAEADPEKLPWGDLGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNED 137
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.429e-17 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEYKPE 512 V+IGINGFGRIGR V R R ++E+VAVND M ++ YDS+ G++ E + + G++ + V R+P +PW + G + V+ESTG+FT VII+AP+ VV GVN+ +Y PE Sbjct: 3 VRIGINGFGRIGRNVFRAAAARSSELEIVAVND-LGDVPTMAHLLAYDSILGRFP--EEVTAEPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHVDGGAKKVIIAAPASGEDFTVVLGVNDGDYDPE 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS--KDAPMFVVGVNEHEYKPE 512 K+++ INGFGRIGR R R + +++VA+ND +++ KYDS G + ++K+ DD + K + + R+P ++PW E + V+E TGVF V+I+AP+ KD P FVVGVNE +YK E Sbjct: 37 KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSG-GVKQASHLLKYDSTLGTFAA-DVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAPAKDKDIPTFVVGVNEGDYKHE 181
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17 Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEY 503 V++GINGFGRIGR R +L + D+E+VAVND + ++ K+DS+ G+ + ++ ++ + T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + VV GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADIEVVAVND-ITDNSTLAHLLKFDSILGRLPY-DVSLEGEDTIVVGPAKIKALEVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITVVLGVNDDKY 146
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_CITFR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Citrobacter freundii GN=gap PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 506 +V R +R D+E+VA+ND + DYM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 125
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17 Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 512 KV++GINGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ G P++ P+++PW + G + V+E +G F VI++AP K+ + V+GVN++ Y+PE Sbjct: 2 KVRVGINGFGRMGRLALRAAWDWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLIDG-TPLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.230e-17 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDD---VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 512 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K D + K + V RNP +PW E G + V+E TGVF V+I+AP K D P +VVGVN +Y P+ Sbjct: 67 KLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYNPD 211
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ESCFE (Glyceraldehyde-3-phosphate dehydrogenase A (Fragment) OS=Escherichia fergusonii GN=gapA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.230e-17 Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDG-TVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 124
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.574e-16 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEY 503 V++GINGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + V+GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.574e-16 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEY 503 V++GINGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + V+GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |