FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.574e-16 Identity = 46/144 (31.94%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 84 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 512 K+++GINGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ P++ PE++PW + G + V+E +G F VI++AP K+ + V+GVN++ Y+PE Sbjct: 2 KIRVGINGFGRMGRLALRAAWGWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLI-DSTPLSFSEYGKPEDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_SEROD (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia odorifera GN=gap PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.056e-16 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 503 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+ + V ++P + W E G + V E+TG+F V+++ PSK D PMFV+GVN Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGSVEVKDGHLVVNGQT-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMGVNLKSY 124
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.056e-16 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 503 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G E V E+TG+F V+++ PSKD+ PMFV G N Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWNEAGVEVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDSTPMFVRGANFDTY 124
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.686e-16 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 503 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKDA PMFV G N +Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGANFDKY 124
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 2.686e-16 Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 75 IMGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 503 + K+K+ INGFGRIGR R R D +++V +ND +++ KYDS+ G + ++K D + K + V RNP +PW + G + V+E TGVF V+I+AP K D P +VVGVNE Y Sbjct: 63 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDA-DVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGY 206
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 4.581e-16 Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHE 500 +++ INGFGRIGR V R + R+ +++VA+ND ++F+YDSVHG + E++ + + G++ + V +RNP E+PW G + V+E TG+FT V+ISAP KD VV GVN HE Sbjct: 3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAIND-LGDAAVNAHLFQYDSVHGHFPG-EVEHDAESLRVMGDR-IAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVN-HE 140
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.581e-16 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 102 NGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYK 506 NGFGRIGR R + R + +E++A+ND +++ KYDS G++ ++K+ DD + K + V R+P ++PW E + V+E TGVF V+I+AP+K D P +VVGVN H+YK Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.814e-16 Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVIL----QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET-GAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNE 494 VKIGINGFGRIGRL R I+ + D+E+VA+ND T + ++ KYDS HG + HE+ +D ++ G+K V+ + IPW + G ++V+E TG +T V+ISAP+ D V VN+ Sbjct: 3 VKIGINGFGRIGRLAFRRIMDLGEETKDIEVVAIND-LTTPAMLAHLLKYDSTHGTF-DHEVSATEDSLVVDGKK-YRVYAEPQAQNIPWVKNDGVDFVLECTGFYTSKAKSQAHLDAGAKRVLISAPAGNDLKTIVYSVNQ 141
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 7.814e-16 Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 503 +V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N Y Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDTY 124
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P_ESCHE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia hermannii GN=gap PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.333e-15 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 126 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 503 +V R R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V ++P + W E G + V E+TG+F V+++ PSK D PMFV G N +Y Sbjct: 1 IVFRAAQTRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDDTPMFVKGANFDKY 124 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |