FC930278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHE 500 VK+ INGFGRIGRL R I + + +E+VAVND D + ++ KYD++ G++ E++V D + G K V F + ++PW + + V+E TG +T V+ISAP+ D V N E Sbjct: 3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.353e-12 Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 93 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHE 500 I ING GRIGR+V R+ L ++ + A+N + + + ++ YD+ HG + + KV+ + + + + RNPE +PW E + V+E+TG F V+++ PSK D M V GVN+++ Sbjct: 5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.353e-12 Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 93 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHE 500 I ING GRIGR+V R+ L ++ + A+N + + + ++ YD+ HG + + KV+ + + + + RNPE +PW E + V+E+TG F V+++ PSK D M V GVN+++ Sbjct: 5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: E4PD_PROMH (D-erythrose-4-phosphate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=epd PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12 Identity = 46/148 (31.08%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNEHEYKPE 512 +++ INGFGRIGR V R + + R ++ +VA+N+ T + ++ KYDS HG++ +++V +D L G+ + +F + ++PW E G + V++ +GV+ V+ S P DA + V GVN+HE K + Sbjct: 3 IRVAINGFGRIGRNVLRALYESGKRAEISVVAINELADATG-IAHLLKYDSSHGRFA-WDIRVNND-LLQVGDDAIRLFHHADIADLPWGELGIDVVLDCSGVYGSRADGEAHIAQGAKKVLFSHPGTIDLDATV-VFGVNQHELKKQ 146
BLAST of FC930278 vs. ExPASy Swiss-Prot
Match: E4PD_SHISS (D-erythrose-4-phosphate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 87 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 512 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146 The following BLAST results are available for this feature:
BLAST of FC930278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930278 ID=FC930278; Name=FC930278; organism=Citrus clementina; type=EST; length=515bpback to top |