FC930306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31 Identity = 80/209 (38.28%), Postives = 116/209 (55.50%), Query Frame = 1 Query: 64 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYFGKMDKTDDSGLASYVANQIDRSLNWKD 687 +++A A+E+L K D+ GA+D T +N AF RI RPR LRDVS++D TT+ G IS PI IAPT F + P+GE G S++A+ S+E++ P G+R+FQLYV D ++ QL++R E GFKA+ +T+DTP G R DI+N+ L +LTL + + G + + + I SL W D Sbjct: 8 DFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQSPKKG-------NAIPYFQMTPISTSLCWND 207
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28 Identity = 69/176 (39.20%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 64 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKN 588 +++A A+++L K +D+ A+D T +N AF RI RPR LRDVSKID TT+ G I+ PI I+PTAF +A +GE +SS+A+ +VE++ + P G+ +FQLYV D +++ Q+V+R E GFKA+ +TVD P LG R + ++ L ++ LK+ Sbjct: 8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKD 183
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26 Identity = 74/227 (32.60%), Postives = 112/227 (49.34%), Query Frame = 1 Query: 58 VMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY----------------EGLYFGKMDKTDDSGLASYVANQIDRSLNWKD 687 + + +AK + P+ +DY GAED+ ++ R F I F P ILRDV+ + VLG +P IAPT F ++ H EGE G +LS+ AT ++E++ P G ++FQLY+ +DR+ LV+R AGF + +TVD P G R D++N +PP LTL+ E L F +D+ + + Y+ D SL + D Sbjct: 37 IQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGT-VGEYLNTVFDPSLTFDD 262
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.298e-24 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 55 NVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLK 585 NV +Y L +++LPKMVYDY GAED++ ++ NR+ F + F+P+ L DVS+ + VLG SMP++I PT P+G+ G LS+ + S+E+++ G +FQLYV R + +V +A G+ + LT D G RE D+ NRF +P + K Sbjct: 7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPMSYSAK 182
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 72/238 (30.25%), Postives = 107/238 (44.96%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I++ +Y A A+ KLP+ ++DY GA + T++ N + + I R RILR+V + + TTV G + MP++++P M GE G LS+ + +EEV+S +FQLYV KDR ++RA+ AG + TVD P G R D + P PH L N Y GK +D ++AN D S++WKD Sbjct: 3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPH-DLGNI-SKYLGKPTHLED--YIGWLANNFDPSISWKD 236
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21 Identity = 71/238 (29.83%), Postives = 108/238 (45.38%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP-------------------------PHLTLKNYEGLYFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I++ +Y A AK KLP+ ++DY GA + TL+ N + + I R R+L++V + + T + G +++MPI+++P M GE LS+ + S+EEV+S +FQLYV KDR ++RA+ AG + TVD P G R D + P PH L N Y GK +D ++AN D S++WKD Sbjct: 3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVGLLGRPH-DLGNI-SRYLGKATTLED--YVGWLANNFDPSISWKD 236
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y GK +D ++AN D S++WKD Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKD 236
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y GK +D ++AN D S++WKD Sbjct: 3 ISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKD 236
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y GK +D ++AN D S++WKD Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKD 236
BLAST of FC930306 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20 Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = 1 Query: 49 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNY------------EGL------------YFGKMDKTDDSGLASYVANQIDRSLNWKD 687 I+ +Y A A+ LP ++ Y GA ++TL+ N S++ R R+L+++S + + TT+ +SMP+ +AP M GE G TLS+ + +EEV+ T +FQLYV +DR ++RA+ AG + TVD P G R D + + P+ ++ Y GL Y GK +D ++AN D S++WKD Sbjct: 3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSG-MSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLED--YIGWLANNFDPSISWKD 236 The following BLAST results are available for this feature:
BLAST of FC930306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930306 ID=FC930306; Name=FC930306; organism=Citrus clementina; type=EST; length=687bpback to top |