FC930316

Overview
NameFC930316
Unique NameFC930316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
Query:  301 VGVACLGAILFGYHLGVVNGA----LEYLAKDLGIAEN--------TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL-DAVPLAAGAF--LCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            + VA +G+  FGY+ GV+N       E++ K L    N        T L    V+    G  +GSF+ G   ++FGR  +  + + + +  G F  LC  A+SV+ +I+GR++           VP+YI EISP  +RGA G++NQL I VGIL A +
Sbjct:   14 ITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQI 171          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR12_BOVIN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Bos taurus GN=SLC2A12 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 57/180 (31.67%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  190 STVKPRSVKAQASAGDIEEATPFKPQEKKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            S +KP+   A+    D     P  P  +      L     A +   L GY LG+++GAL  +   L +  +   Q  +VSSLL GA + S  GG L D++GR     L +  L  G+ +   + S  T+I GR+              +YI+EI+P   RG L S+N+L I +GIL A +
Sbjct:   11 SLLKPKGRAAETDGSDRASGGPHPPWARGCGMYTLLSSVTAAVSGFLVGYELGIISGALLQIRTLLVLTCHE--QEMVVSSLLIGALLASLIGGVLIDRYGRRAAIILSSCLLGLGSLVLIISLSYTTLIGGRIAIGVFISLSSTATCVYIAEIAPQHRRGLLVSLNELMIVIGILFAYI 188          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
Query:  301 VGVACLGAILFGYHLGVVNGA----LEYLAKDLGIAEN--------TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQL-DAVPLAAGAF--LCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            + VA +G+  FGY+ GV+N       E++ K L    N        T L    V+    G  +GSF+ G   ++FGR  +  + + + +  G F  LC  A+SV+ +I+GR++           VP+YI EISP  +RGA G++NQL I VGIL A +
Sbjct:   14 ITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQI 171          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  301 VGVACLGAILFGYHLGVVNGALEYLAKDL------GIAEN-------TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL---CATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            + +A +G+  FGY+ GV+N A E + KD         +EN       T L    V+    G  +GSF+ G   ++FGR  +  +  +   AG  L   C  AQSV+ +I+GR++           VP+YI EISP  +RGA G++NQL I +GIL A +
Sbjct:   14 LSIATIGSFQFGYNTGVIN-APETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQI 171          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 1
Query:  259 KPQEKKSSGVVLPFVGVACLGAILFGYHLGVVNGA----LEYLAKDLGIAEN--------TVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFL---CATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            KP     +  ++  + VA +G+  FGY+ GV+N       E++ K L    N        T L    V+    G  +GSF+ G   ++FGR  +  +  +  A G  L   C  A+SV+ +I+GR++           VP+YI EISP  +RGA G++NQL I +GIL A +
Sbjct:   24 KPHTLAVTPALIFAITVATIGSFQFGYNTGVINAPETIIKEFINKTLTDKANAPPSEVLLTNLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAATGGCLMGLCKIAESVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQI 195          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  223 ASAGDIEEATPFKPQEKKS-SGVVLPFVGVACLGAILFGYHLGVVNGAL-----EYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGIL 717
            A +G++ ++      E  S S V+LPF+  A LG +LFGY +G  +GA        L+       + V  G +VS  L GA +GS +   +AD  GR R   + AV    G+ +   A  +  +++GR+L            PLYI+E  P+ IRG L S+ +LFI +GIL
Sbjct:   76 ADSGEVADSLASDAPESFSWSSVILPFIFPA-LGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGIL 245          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  310 ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            A +  +L GY LG+++GAL  +   L ++ +   Q  +VSSLL GA + S TGG L D++GR     L +  L  G+ +   + S   +I+GR+              +YI+EI+P   RG L S+N+L I +GIL+A +
Sbjct:   51 AAVSGLLVGYELGIISGALLQIKTLLTLSCHE--QEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 188          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = 1
Query:  190 STVKPRSVKAQASAGDIEEATPFKPQEKKSSGVVLPFVGV-ACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAALV 729
            +T  P  +  + +A + E +    P   +  G+      V A +  +L GY LG+++GAL  +   L ++ +   Q  +VSSL+ GA + S TGG L D++GR     L +  L  G+ +   + S   +I+GR+              +YI+EI+P   RG L S+N+L I +GIL+A +
Sbjct:    6 NTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHE--QEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 184          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 54/152 (35.53%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  271 KKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAA 723
            + SS  VL  V +  LG I FG+  G  +     + KDLG+   TV +  +  SL   GA VG+   G +A+  GR  +  + A+P   G    + A+    + +GR+L           VP+YI+EI+P  +RGALGSVNQL + +GI+ A
Sbjct:   43 RDSSISVLACVLIVALGPIQFGFTCGYSSPTQAAITKDLGL---TVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLA 191          
BLAST of FC930316 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 53/152 (34.87%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  271 KKSSGVVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLL-AGATVGSFTGGSLADKFGRTRTFQLDAVPLAAGAFLCATAQSVQTMIIGRVLXXXXXXXXXXXVPLYISEISPN*IRGALGSVNQLFICVGILAA 723
            + SS  VL  V +  LG I FG+  G  +     + KDLG+   TV +  +  SL   GA VG+   G +A+  GR  +  + A+P   G    + A+    + +GR+L           VP+YI+EI+P  +RG LGSVNQL + +GI+ A
Sbjct:   42 RDSSISVLACVLIVALGPIQFGFTCGYSSPTQAAITKDLGL---TVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLA 190          
The following BLAST results are available for this feature:
BLAST of FC930316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
GTR3_PONAB9.335e-1634.81Solute carrier family 2, facilitated glucose trans... [more]
GTR12_BOVIN9.335e-1631.67Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN1.219e-1534.81Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA1.592e-1535.22Solute carrier family 2, facilitated glucose trans... [more]
GTR14_HUMAN1.592e-1532.56Solute carrier family 2, facilitated glucose trans... [more]
XYLL3_ARATH2.080e-1533.92D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
GTR12_MACFA2.080e-1535.00Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN2.080e-1530.39Solute carrier family 2, facilitated glucose trans... [more]
ERDL4_ARATH2.080e-1535.53Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
ERDL6_ARATH3.547e-1534.87Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionC34006B07EF PostHarvC1 Citrus clementina cDNA clone C34006B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930316 ID=FC930316; Name=FC930316; organism=Citrus clementina; type=EST; length=730bp
GACGCAATCAAAGCGAGTGTATGCTTTGACGCCCGCAATCGGAGGCGTGC
GTGCGTGTTGGCTGCTGGCTTTGCTAACACCAGAAGTGTTGCTTTGAATT
GTAATTTTACTAGTAATAATAGTATTTGCATGAGAGATATGGGAATGAAG
CTCACACGTGCCACTCAGGGCGTTGAAACTCTGTTTAGATCAACGGTTAA
GCCCCGATCGGTGAAAGCTCAAGCCTCCGCTGGAGACATTGAAGAAGCTA
CTCCTTTCAAGCCTCAGGAGAAAAAATCTTCTGGAGTAGTTTTGCCTTTT
GTTGGGGTTGCTTGTTTGGGAGCTATTTTATTTGGTTACCACTTAGGGGT
TGTAAATGGCGCTCTTGAATACCTTGCCAAGGACCTTGGGATTGCTGAAA
ACACTGTCCTGCAAGGATGGATTGTCAGCTCATTACTTGCTGGTGCCACT
GTTGGTTCTTTTACTGGAGGATCATTGGCTGACAAATTTGGCAGAACAAG
GACTTTTCAGTTAGACGCAGTTCCCCTCGCAGCTGGAGCATTTCTATGTG
CTACTGCCCAGAGTGTACAGACTATGATAATTGGCCGCGTACTGGCAGGC
ATTGGAATTGGCATCTCATCTGCCATTGTACCACTTTATATATCTGAGAT
CTCACCAAACTGAATTCGTGGTGCTCTTGGATCAGTAAACCAACTTTTTA
TATGTGTTGGGATTCTTGCAGCATTGGTAG
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