FC930318

Overview
NameFC930318
Unique NameFC930318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.984e-40
Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  151 GFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            G  K   ++Y G +T YV++ C+VAA+GG IFGYDIGISGGVTSM  FL++FF +VY +K+QA+ES   YCKYD++ L  FT                +TR +GR+ S+                   + ML+ GR++LG GIGF NQ+VPLYLSE+AP   RG LN+ FQL+ T+GI  AN+ +Y
Sbjct:   10 GVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEEFFHTVYEKKKQAHESN--YCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASIVCGGISFLIGSGLNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMFQLATTIGIFTANMVNY 193          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.159e-39
Identity = 86/179 (48.04%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  184 GNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANE-----STNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            G +T +V+ +C++AAMGG+IFGYDIG+SGGV SM  FLK+FFP VY+ Q+ +      S N YC ++S+ LT FT                VTR +GRK S+                   + MLI+ RLLLG G+GFANQSVPLYLSEMAP ++RGA++ GFQL I +G L ANV +Y
Sbjct:   18 GKITYFVVASCVMAAMGGVIFGYDIGVSGGVMSMGPFLKRFFPKVYKLQEEDRRRRGNSNNHYCLFNSQLLTSFTSSLYVSGLIATLLASSVTRSWGRKPSIFLGGVSFLAGAALGGSAQNVAMLIIARLLLGVGVGFANQSVPLYLSEMAPAKYRGAISNGFQLCIGIGFLSANVINY 196          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39
Identity = 80/176 (45.45%), Postives = 109/176 (61.93%), Query Frame = 1
Query:  178 YPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            Y   +T Y +  CIV +MGG +FGYD+G+SGGVTSM  FLK+FFP +Y+++Q + +   YCKYD++ LT+FT                VTR +GR+ S+                   I MLI+GR+ LG GIGF NQ+VPLYLSEMAP + RG +N  FQL+  +GIL+AN+ +Y
Sbjct:   18 YEHRITSYFIFACIVGSMGGSLFGYDLGVSGGVTSMDDFLKEFFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYVTRIYGRRGSILVGSVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPLYLSEMAPAKIRGTVNQLFQLTTCIGILVANLINY 193          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 5.754e-39
Identity = 87/189 (46.03%), Postives = 113/189 (59.79%), Query Frame = 1
Query:  142 AVGGFDKGNG-KEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            AVG  +   G K +P  LT  V + C++AA+GGL+FGYDIGISGGVTSM +FL  FFP VY K+      N YCK+D + L +FT                V+R FGRK ++                   + MLI GR+LLGFGIGF NQ+VPL++SE+AP R+RG LN+ FQ  IT+GIL A+  +Y
Sbjct:    2 AVGSMNVEEGTKAFPAKLTGQVFLCCVIAAVGGLMFGYDIGISGGVTSMDTFLLDFFPHVYEKKHRVHENN-YCKFDDQLLQLFTSSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPLFISEIAPARYRGGLNVMFQFLITIGILAASYVNY 189          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.186e-38
Identity = 83/182 (45.60%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  166 NGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDYF 708
            N   +   +T YV +  ++AA+GGLIFGYDIGISGGV++M  FLK+FFP+V+ RK+  +E  N YCKYD++ L +FT                   + GR+ +M                   + MLI+GRL LGFG+GF NQ+VPL+LSE+AP + RG LNI FQL +T+GILIAN+ +YF
Sbjct:    9 NAPAFEAKMTVYVFICVMIAAVGGLIFGYDIGISGGVSAMDDFLKEFFPAVWERKKHVHE--NNYCKYDNQFLQLFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNYF 188          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.855e-38
Identity = 89/189 (47.09%), Postives = 113/189 (59.79%), Query Frame = 1
Query:  142 AVGGFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            A  G  K   ++Y G +T  V V C+VAA+GG IFGYDIGISGGV SM +FL+KFF SVY +K+ A+E  N YCKYD + L  FT                +TR +GR+ S+                   + ML++GR++LG GIGF NQ+VPLYLSEMAP   RG LNI FQL+ T GI  AN+ +Y
Sbjct:    7 APAGVAKERAEQYQGKVTFAVFVACMVAAVGGSIFGYDIGISGGVISMDAFLEKFFRSVYLKKKHAHE--NNYCKYDDQRLAAFTSSLYLAGLAASLVAGPITRIYGRRASIISGGISFLIGAALNATAINLAMLLLGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNIMFQLATTSGIFTANMVNY 193          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.729e-38
Identity = 84/183 (45.90%), Postives = 111/183 (60.66%), Query Frame = 1
Query:  157 DKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            D  +       +T  V+++CIVAA  GLIFGYDIGISGGVT+M  FL+KFFPSV +K  +   TN+YC YDS+ LT FT               R+T  +GR+ +M                   I MLI GR+LLGFG+GF NQ+ P+YLSE+AP R+RGA NIGF   I++G++ AN+ +Y
Sbjct:    9 DVSSAGNIDAKITAAVVMSCIVAASCGLIFGYDIGISGGVTTMKPFLEKFFPSVLKKA-SEAKTNVYCVYDSQLLTAFTSSLYVAGLVASLVASRLTAAYGRRTTMILGGFTFLFGALINGLAANIAMLISGRILLGFGVGFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGVVAANLINY 190          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38
Identity = 77/175 (44.00%), Postives = 109/175 (62.29%), Query Frame = 1
Query:  184 GNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            G L  Y+ +  + A  GGL+FGYDIG++GGVTSMP FL+KFFPS+Y R QQ ++S + YC YD + L +FT                V R++GRK +M                   + ML++GR+LLGFG+G  N +VPLYLSE AP ++RG LN+ FQL++T+GI++A + +Y
Sbjct:   23 GGLNWYIFIVALTAGSGGLLFGYDIGVTGGVTSMPEFLQKFFPSIYDRTQQPSDSKDPYCTYDDQKLQLFTSSFFLAGMFVSFFAGSVVRRWGRKPTMLIASVLFLAGAGLNAGAQDLAMLVIGRVLLGFGVGGGNNAVPLYLSECAPPKYRGGLNMMFQLAVTIGIIVAQLVNY 197          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37
Identity = 85/189 (44.97%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  142 AVGGFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM-XXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            A GG  + +  EY G LT YVL+  +VAA GG++ GYD G++GGV SM  F +KFFP VY K+Q    T+ YC YD+  L +F                 +TR +GRK SM                    I MLIVGR+LLGFG+G  +Q VP YLSE+AP+  RG LNIG+QL +T+GILIA + +Y
Sbjct:    8 ASGGASRSS--EYQGGLTAYVLLVALVAACGGMLLGYDNGVTGGVASMEQFERKFFPDVYEKKQQIVETSPYCTYDNPKLQLFVSSLFLAGLISCIFSAWITRNWGRKASMGIGGIFFIAAGGLVNAFAQDIAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGYQLFVTIGILIAGLVNY 194          
BLAST of FC930318 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35
Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 1
Query:  175 EYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALNIGFQLSITVGILIANVFDY 705
            +Y G LT YV++   +AA GGL+ GYD G++GGV S+ +F KKFFP V+ K+Q     + YC YD+  L +F                 +TR +GRK++M                   + MLIVGR+LLGFG+G  +Q VP YLSE+AP+  RG LNIG+QL +T+GILIA + +Y
Sbjct:   18 DYRGGLTVYVVMVAFMAACGGLLLGYDNGVTGGVVSLEAFEKKFFPDVWAKKQEVHEDSPYCTYDNAKLQLFVSSLFLAGLVSCLFASWITRNWGRKVTMGIGGAFFVAGGLVNAFAQDMAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGYQLFVTIGILIAGLVNY 194          
The following BLAST results are available for this feature:
BLAST of FC930318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
STP7_ARATH3.984e-4046.24Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STP3_ARATH1.159e-3948.04Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
STP14_ARATH4.405e-3945.45Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
STP2_ARATH5.754e-3946.03Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
STP6_ARATH2.186e-3845.60Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STA_RICCO2.855e-3847.09Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
STP5_ARATH3.729e-3845.90Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
HUP2_CHLKE6.361e-3844.00H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
HUP3_CHLKE5.385e-3744.97H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
HUP1_CHLKE2.263e-3542.94H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]

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Properties
Property NameValue
Genbank descriptionC34006B09EF PostHarvC1 Citrus clementina cDNA clone C34006B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930318 ID=FC930318; Name=FC930318; organism=Citrus clementina; type=EST; length=708bp
GGTATCTTCTTTCTTTATTGCCTGCTTACTCTTTAGTCTCCAATTTTCTT
GTTTATTTTCTTCTTCTTCTTCTTCTCCGTGTCATCGTTTCTTTATCTTC
TTAGAATCAAGAAAAAAAAGGAAAAGGCTGAAAAAATGCCTGCTGTTGGA
GGATTTGATAAGGGTAACGGGAAAGAGTACCCCGGAAACCTCACCCCATA
CGTGTTAGTAACATGTATTGTTGCTGCCATGGGTGGCCTCATCTTTGGTT
ATGATATTGGGATTTCAGGTGGTGTGACCTCAATGCCTTCATTTTTGAAG
AAGTTTTTCCCGTCGGTGTACAGGAAGCAACAGGCGAACGAGTCAACGAA
TCTGTACTGTAAGTATGACAGTGAGACGTTGACTATGTTCACGTCGTCGC
TTTACTTGGCTGCTCTATTATCATCACTGGTGGCGTCAAGGGTGACGAGA
CAATTCGGAAGAAAACTGTCTATGTTTTTCGGCGGTATCCTGTTTCTTGC
CGGTGCCTTGCTCAATGGCTTCGCCCAAGCCATTTGGATGCTTATTGTTG
GCCGACTTTTGCTCGGTTTCGGCATCGGTTTCGCTAACCAGTCCGTGCCA
CTCTACCTCTCTGAGATGGCTCCATACAGATTCAGAGGTGCTTTGAACAT
TGGGTTTCAGTTATCAATCACAGTTGGAATTCTTATAGCAAATGTGTTTG
ACTACTTC
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