FC930319

Overview
NameFC930319
Unique NameFC930319
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.667e-13
Identity = 58/194 (29.90%), Postives = 90/194 (46.39%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 643
            L+G  AL+TGG  GIG+ I  +    GASV    R ++ L+  ++  RS G K      D+  +   ++++ +   HF GKL+ILVN A       A+D +   +  +M I+    + +   A  +LK             ++ IS+     A  Y+            +TR LA EW  D +IRVNG+ PG I
Sbjct:    7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK-------ASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVI 192          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 643
            L GKVAL+TG G GIG  I+   G+ GA V +     ++  +  V  +++ G  A+  + DV   E   K++  T  HFG LDI+ + A        +D++P  F  V  +++ G F +  EA +++++            IL  S T                       R +A++ G D  I VN +APG I
Sbjct:    7 LDGKVALVTGAGRGIGAAIAVALGERGAKVVVNYAHSREAAEKVVEQIKANGTDAIAIQADVGDPEATAKLMAETVRHFGYLDIVSSNAGIVSFGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHMRE--------GGRIILTSSNTACVKGVPKHAVYSGSKGAIDTFVRCMAIDCG-DKKITVNAVAPGAI 191          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 59/192 (30.73%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   71 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 643
            GKV ++TGGG GIG  I   F + GA V I  +     +A   A+       V    DV R+E  + +V  T   FG+LD +VN A  +      E+ S  GFR +++++ +GT+T+   AL +L+K            ++NIS+ +        +           +T+ LAL+  + Y +RVN I+PG I
Sbjct:    9 GKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKD----EARGRAVERELPGTVFLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPEETSAQGFRQLLELNLLGTYTLTKLALPHLRK--------SRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALD-ESQYGVRVNCISPGNI 187          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:   68 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL-VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 433
            +GK+AL+TGG SGIG   + +F   GA V I GRR+  LD AV+    +G    G +GD+ + E   K+ +   +  GKLDIL  NA  GNFL   E       RT  DI+  GT     +AL
Sbjct:    5 EGKIALVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVN---QIGKNVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITEEQVDRT-FDINVKGTIFTVQKAL 123          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 61/206 (29.61%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   17 KEISKMSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAP 634
            +E  K+    P +    KG+VAL+TGGG+GIG      F + GASV +        D  V+ ++ +G KAVG +      E    VV++  + FG++DI+VN A      +  ++  + +  VM++ + GT+ +   A  Y  K            +LN ++T     ++ Q +           +R +ALE GA Y+I VN IAP
Sbjct:  296 EESLKLGPNDPGEKVDFKGRVALVTGGGAGIGRAYCLAFARAGASVVVNDLVNP--DDVVNEIKKMGGKAVGAKFSA---EDGDAVVKAAIDAFGRVDIVVNNAGILRDKAFHNMDDSLWDPVMNVHARGTYKVTKAAWPYFLK-------QKYGRVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALE-GAKYNIYVNTIAP 488          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: YHXC_BACSU (Uncharacterized oxidoreductase yhxC OS=Bacillus subtilis GN=yhxC PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12
Identity = 61/203 (30.05%), Postives = 88/203 (43.35%), Query Frame = 2
Query:   41 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 643
            + P KA  L+GK A+ITGG SGIG  +S  F K GA+V I+     Q  +     +   G+K +   GDV  +     VV    + F  +DILVN AA   +  S E ++ +        +    F +    L +LKK            I+N ++   Y  +   I            TR+L+        IRVN +APGPI
Sbjct:   31 DKPKKAKKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAEETKQYVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAEQHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKK---------GSSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSL-VQQGIRVNAVAPGPI 223          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12
Identity = 54/202 (26.73%), Postives = 86/202 (42.57%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL 670
            ++ +VAL+TG   GIGFEI+ +F + GASV +   R +  + A S L   G  A     DV ++      V    + +G+LDILVN A    +   E+   + F  ++ +     F         +KK            I+NI++         +            +T+  ALE GA + I VN + PG +      N+L
Sbjct:    1 MRKQVALVTGAAGGIGFEIAREFAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQKQYGRLDILVNNAGIQHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKK-------QQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALE-GAPHGITVNALCPGYVDTQLVRNQL 194          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 53/197 (26.90%), Postives = 95/197 (48.22%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTP 655
            +K KVA++TG  SGIG  I+ +  + GAS+ ++GR +Q L+      + L   A     DV  + +   ++++  +HFG +DI+VN+A  +      D +   + T++D++  GT  +    L YL K            I+N+++   +  +               IT++L  E  A   ++V  I+PG + DTP
Sbjct:    4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLN---EIAQQLNTPAKVVSADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLK-------QSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKEL-ARTGVKVTSISPGMV-DTP 188          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 53/197 (26.90%), Postives = 95/197 (48.22%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTP 655
            +K KVA++TG  SGIG  I+ +  + GAS+ ++GR +Q L+      + L   A     DV  + +   ++++  +HFG +DI+VN+A  +      D +   + T++D++  GT  +    L YL K            I+N+++   +  +               IT++L  E  A   ++V  I+PG + DTP
Sbjct:    4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLN---EIAQQLNTPAKVVSADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLK-------QSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEKEL-ARTGVKVTSISPGMV-DTP 188          
BLAST of FC930319 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 2
Query:   65 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPI 643
            L  KVAL+T    GIGF I+ +  + GA V +  R++Q +D AV+ L+  G+   G    V + E  +++V +  +  G +DIL+ NAA   F  S  D+    +  ++D++   T  +    +  + K            I+ +S+   Y+                 +T+NLALE  A+ ++RVN +APG I
Sbjct:   12 LDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAK-------RGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALEL-AESNVRVNCLAPGLI 197          
The following BLAST results are available for this feature:
BLAST of FC930319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
TRN2_DATST1.667e-1329.90Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
VER1_ASPPA2.843e-1328.35Versicolorin reductase OS=Aspergillus parasiticus ... [more]
DHB14_BOVIN2.843e-1330.7317-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
YKVO_BACSU4.850e-1340.65Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
FOX2_NEUCR8.272e-1329.61Peroxisomal hydratase-dehydrogenase-epimerase OS=N... [more]
YHXC_BACSU1.411e-1230.05Uncharacterized oxidoreductase yhxC OS=Bacillus su... [more]
YXJF_BACSU1.843e-1226.73Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
Y2049_STAEQ2.407e-1226.90Uncharacterized oxidoreductase SERP2049 OS=Staphyl... [more]
Y2036_STAES2.407e-1226.90Uncharacterized oxidoreductase SE_2036 OS=Staphylo... [more]
DHRS4_BOVIN3.143e-1228.35Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]

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Properties
Property NameValue
Genbank descriptionC34006B10EF PostHarvC1 Citrus clementina cDNA clone C34006B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930319 ID=FC930319; Name=FC930319; organism=Citrus clementina; type=EST; length=670bp
GCAAAAGCGGTCAGATAAAGAAATAAGCAAAATGTCGTTGGAATCTCCGT
TCAAGGCCGATATATTGAAAGGCAAAGTCGCTTTGATCACAGGAGGTGGT
TCGGGAATTGGGTTTGAGATATCAACCCAATTCGGTAAACATGGAGCTTC
AGTTGCAATCATGGGACGTCGCAAGCAAGTCCTTGATGCTGCTGTTTCTG
CTCTTCGGTCTCTTGGAATCAAGGCTGTTGGCTTTGAAGGAGATGTTCGT
AGGCAGGAACATGCGAAAAAAGTTGTGGAATCAACTTTTGAGCATTTTGG
GAAGCTTGACATTCTTGTGAATGCTGCGGCCGGCAACTTTCTTGTATCAG
CTGAGGATTTGTCCCCTAATGGGTTTCGAACAGTTATGGATATTGATTCT
GTCGGCACATTCACAATGTGCCATGAAGCACTTAAATATCTTAAAAAGGG
TGGACCTGGGAGAAGCTCAGCTGGTGGTGGATCCATTTTGAACATTAGTG
CTACTTTACATTATACAGCTTCTTGGTACCAAATACATGTAGCTGCAGCC
AAGGCAGCTGTTGATGCCATTACCAGAAACTTGGCACTGGAATGGGGAGC
TGACTATGATATTCGAGTCAATGGAATTGCCCCAGGCCCCATCGGTGATA
CCCCGGGCATGAATAAACTT
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