FC930322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 689 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGD 183
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 72/218 (33.03%), Postives = 102/218 (46.79%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE---------GDNMIERSTNLDWY 725 + K H NI IGHVD GK+T T I K + ER A + +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D D ++E+ L + G+ + P + S + GD ++E +D Y Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCDMVDDPELLELVDMEIREL---LNEYGFPGDDTPIIQGSALKALEDPNSEWGDKILELMHTIDEY 201
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_EIMTE (Elongation factor Tu, apicoplast OS=Eimeria tenella GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 70/211 (33.18%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYK 728 K KTH+NI IGHVD GK+T T + L I+ + + + +D E+ RGITI+ + ++ET + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK+D + + EV L YN + + S + IE++ N W K Sbjct: 8 KTKTHLNIGTIGHVDHGKTTLTAAITSYLSKINNTKAKSYSE---------------IDSAPEEKARGITINTSHIEYETNLRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTREHLLLAKQVGVPNIIVFLNKIDMVE---DNELLELVELEVRELLDIYEYNGDSTSIIKGSALKALEYIEKNDLNNKWVK 193
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG 677 + K H+NI IGHVD GK+T T + L + + ++++ +D E+ RGITI+ A ++ETT+ + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + + E+ L ++ + +P + SG Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAAARKYDE---------------IDAAPEEKARGITINTAHVEYETTQRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLAKQVGVPSIVVFLNKVDQLD---DEELLELVELELRELLTSYDFDGDNIPIIRGSG 175
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 65/190 (34.21%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K HINI IGHVD GK+T T + L ID V +++F++ +D E+ RGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L K + E+VPFV Sbjct: 8 RSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDE---------------IDAAPEEKARGITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSIVVFLNKADMID---DEELLELVELEVRELLSKYDFPGEEVPFV 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTE (Elongation factor Tu OS=Clostridium tetani GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 68/190 (35.79%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 665 + K H+NI IGHVD GK+T T + LG + F K +FKY + DK E+ERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + A E+V+ EV + + G+ + P V Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTILGH------KGFAK--------AFKYDEI-DKAPEEKERGITISTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEHIVVFLNKAD----QVDDAELIELVEMEVRELMNEYGFPGDDAPVV 171
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCH (Elongation factor Tu OS=Chlorobium chlorochromatii (strain CaD3) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 67/200 (33.50%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 689 ++K H+NI IGHVD GK+T T + L + +R F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + EGD Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITLVLS------------KQGLAQERDFGS---IDKAPEERERGITISTAHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLSQYDFPGDDIPIIKGSALKAMEGD 181
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFE 683 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED----MMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQ 177
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU2_THET8 (Elongation factor Tu-B OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufB PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 66/189 (34.92%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 665 + K H+N+ IGHVD GK+T T L + AAE K +DK ER RGITI+ A ++ET K + + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + ++VP + Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAALTFVT--------------AAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVI 172
BLAST of FC930322 vs. ExPASy Swiss-Prot
Match: EFTU_THEFY (Elongation factor Tu OS=Thermobifida fusca (strain YX) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21 Identity = 66/200 (33.00%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 99 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 689 + K H+NI IGH+D GK+T T I K + +++ + F +DK ERERGITI I+ +++T + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + +D + EV L + + ++VP + +S EGD Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFEDIDKAPEERERGITISISHVEYQTESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKSDMVD---DEEIFDLVELEVRELLNEYEFPGDEVPVIRVSALKALEGD 184 The following BLAST results are available for this feature:
BLAST of FC930322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930322 ID=FC930322; Name=FC930322; organism=Citrus clementina; type=EST; length=741bpback to top |