FC930330

Overview
NameFC930330
Unique NameFC930330
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.559e-33
Identity = 74/153 (48.37%), Postives = 96/153 (62.75%), Query Frame = 1
Query:   25 VLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQAN-ESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            V+++CI+AA GGL+FGYD+G+SGGVTSMP FL+KFFP VYRK  A  +  + YCKYD++ L +FT                 TR  GR+L+M                   + MLI GR+LLG G+GFANQ+VPL+LSE+AP R RG L+I F
Sbjct:   23 VIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILF 175          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.036e-33
Identity = 76/158 (48.10%), Postives = 99/158 (62.66%), Query Frame = 1
Query:   10 KKALFVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            K  ++V +  I+AA+GGLIFGYDIGISGGVT+M  FLK+FFPSVY RK+ A+E  N YCKYD++ L +FT                   + GR+ +M                   I+MLI+GR+LLGFG+GF NQ+VPL+LSE+AP R RG L+I F
Sbjct:   17 KMTVYVFICVIIAAVGGLIFGYDIGISGGVTAMDDFLKEFFPSVYERKKHAHE--NNYCKYDNQFLQLFTSSLYLAALVASFFASATCSKLGRRPTMQLASIFFLIGVGLAAGAVNIYMLIIGRILLGFGVGFGNQAVPLFLSEIAPARLRGGLNIVF 172          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 6.550e-32
Identity = 67/150 (44.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query:   22 FVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALD 471
            + +  CIV +MGG +FGYD+G+SGGVTSM  FLK+FFP +Y+++Q + +   YCKYD++ LT+FT                VTR +GR+ S+                   I MLI+GR+ LG GIGF NQ+VPLYLSEMAP + RG ++
Sbjct:   25 YFIFACIVGSMGGSLFGYDLGVSGGVTSMDDFLKEFFPGIYKRKQMHLNETDYCKYDNQILTLFTSSLYFAGLISTFGASYVTRIYGRRGSILVGSVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPLYLSEMAPAKIRGTVN 174          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.906e-31
Identity = 72/158 (45.57%), Postives = 97/158 (61.39%), Query Frame = 1
Query:   10 KKALFVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            K   +V++ C+VAA+GG IFGYDIGISGGVTSM  FL++FF +VY +K+QA+ES   YCKYD++ L  FT                +TR +GR+ S+                   + ML+ GR++LG GIGF NQ+VPLYLSE+AP   RG L++ F
Sbjct:   22 KVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEEFFHTVYEKKKQAHESN--YCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASIVCGGISFLIGSGLNAGAVNLAMLLAGRIMLGVGIGFGNQAVPLYLSEVAPTHLRGGLNMMF 177          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 2.489e-31
Identity = 70/152 (46.05%), Postives = 92/152 (60.53%), Query Frame = 1
Query:   25 VLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            V + C++AA+GGL+FGYDIGISGGVTSM +FL  FFP VY K+      N YCK+D + L +FT                V+R FGRK ++                   + MLI GR+LLGFGIGF NQ+VPL++SE+AP R+RG L++ F
Sbjct:   23 VFLCCVIAAVGGLMFGYDIGISGGVTSMDTFLLDFFPHVYEKKHRVHENN-YCKFDDQLLQLFTSSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPLFISEIAPARYRGGLNVMF 173          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 5.545e-31
Identity = 75/158 (47.47%), Postives = 94/158 (59.49%), Query Frame = 1
Query:   10 KKALFVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            K    V V C+VAA+GG IFGYDIGISGGV SM +FL+KFF SVY +K+ A+E  N YCKYD + L  FT                +TR +GR+ S+                   + ML++GR++LG GIGF NQ+VPLYLSEMAP   RG L+I F
Sbjct:   22 KVTFAVFVACMVAAVGGSIFGYDIGISGGVISMDAFLEKFFRSVYLKKKHAHE--NNYCKYDDQRLAAFTSSLYLAGLAASLVAGPITRIYGRRASIISGGISFLIGAALNATAINLAMLLLGRIMLGVGIGFGNQAVPLYLSEMAPTHLRGGLNIMF 177          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 5.545e-31
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 1
Query:   22 FVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            ++ +  + A  GGL+FGYDIG++GGVTSMP FL+KFFPS+Y R QQ ++S + YC YD + L +FT                V R++GRK +M                   + ML++GR+LLGFG+G  N +VPLYLSE AP ++RG L++ F
Sbjct:   28 YIFIVALTAGSGGLLFGYDIGVTGGVTSMPEFLQKFFPSIYDRTQQPSDSKDPYCTYDDQKLQLFTSSFFLAGMFVSFFAGSVVRRWGRKPTMLIASVLFLAGAGLNAGAQDLAMLVIGRVLLGFGVGGGNNAVPLYLSECAPPKYRGGLNMMF 181          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.046e-29
Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   10 KKALFVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            K  ++V +  ++AA+GGLIFGYDIGISGGV++M  FLK+FFP+V+ RK+  +E  N YCKYD++ L +FT                   + GR+ +M                   + MLI+GRL LGFG+GF NQ+VPL+LSE+AP + RG L+I F
Sbjct:   16 KMTVYVFICVMIAAVGGLIFGYDIGISGGVSAMDDFLKEFFPAVWERKKHVHE--NNYCKYDNQFLQLFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVF 171          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.278e-27
Identity = 66/154 (42.86%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   22 FVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM-XXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            +VL+  +VAA GG++ GYD G++GGV SM  F +KFFP VY K+Q    T+ YC YD+  L +F                 +TR +GRK SM                    I MLIVGR+LLGFG+G  +Q VP YLSE+AP+  RG L+IG+
Sbjct:   25 YVLLVALVAACGGMLLGYDNGVTGGVASMEQFERKFFPDVYEKKQQIVETSPYCTYDNPKLQLFVSSLFLAGLISCIFSAWITRNWGRKASMGIGGIFFIAAGGLVNAFAQDIAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGY 178          
BLAST of FC930330 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 6.344e-27
Identity = 61/154 (39.61%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   19 LFVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSMXXXXXXXXXXXXXXXXXXXIWMLIVGRLLLGFGIGFANQSVPLYLSEMAPYRFRGALDIGF 480
            ++V++   +AA GGL+ GYD G++GGV S+ +F KKFFP V+ K+Q     + YC YD+  L +F                 +TR +GRK++M                   + MLIVGR+LLGFG+G  +Q VP YLSE+AP+  RG L+IG+
Sbjct:   25 VYVVMVAFMAACGGLLLGYDNGVTGGVVSLEAFEKKFFPDVWAKKQEVHEDSPYCTYDNAKLQLFVSSLFLAGLVSCLFASWITRNWGRKVTMGIGGAFFVAGGLVNAFAQDMAMLIVGRVLLGFGVGLGSQVVPQYLSEVAPFSHRGMLNIGY 178          
The following BLAST results are available for this feature:
BLAST of FC930330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
STP13_ARATH1.559e-3348.37Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
STP8_ARATH2.036e-3348.10Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP14_ARATH6.550e-3244.67Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
STP7_ARATH1.906e-3145.57Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STP2_ARATH2.489e-3146.05Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
STA_RICCO5.545e-3147.47Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
HUP2_CHLKE5.545e-3142.86H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
STP6_ARATH1.046e-2943.67Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
HUP3_CHLKE1.278e-2742.86H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
HUP1_CHLKE6.344e-2739.61H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]

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Properties
Property NameValue
Genbank descriptionC34006C09EF PostHarvC1 Citrus clementina cDNA clone C34006C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930330 ID=FC930330; Name=FC930330; organism=Citrus clementina; type=EST; length=481bp
TGGCATTAAAAGAAAGCATTGTTCGTGTTAGTAACATGTATTGTTGCTGC
CATGGGTGGCCTCATCTTTGGTTATGATATTGGGATTTCAGGTGGTGTGA
CCTCAATGCCTTCATTTTTGAAGAAGTTTTTCCCGTCGGTGTACAGGAAG
CAACAGGCGAACGAGTCAACGAATCTGTACTGTAAGTATGACAGTGAGAC
GTTGACTATGTTCACGTCGTCGCTTTACTTGGCTGCTCTATTATCATCAC
TGGTGGCGTCAAGGGTGACGAGACAATTCGGAAGAAAACTGTCTATGTTT
TTCGGCGGTATCCTGTTTCTTGCCGGTGCCTTGCTCAATGGCTTCGCCCA
AGCCATTTGGATGCTTATTGTTGGCCGACTTTTGCTCGGTTTCGGCATCG
GTTTCGCTAACCAGTCCGTGCCACTCTACCTCTCTGAGATGGCTCCATAC
AGATTCAGAGGTGCTTTGGACATTGGGTTTC
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