FC930333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16 Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGY------GLKPAQPQ-GDTFFHALE--CEPTLQIGYQPAD-PISVVTAGPSLNNYMQGWLP 424 +ELE LE+QLD SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++ L E Q++ A GY ++ P G+ FFH+LE EPTLQIG+ P S VTA +M WLP Sbjct: 125 KELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRK-------------LEESNQLHGQVWEHGATLLGYERQSPHAVQQVPPHGGNGFFHSLEAAAEPTLQIGFTPEQMNNSCVTA------FMPTWLP 248
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 29 ELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQP--QGDTFFHALECEPTLQI----GYQPADPISVVTAGPSLNNYMQGWL 421 ELE LERQ+D SL+QIRST+ + MLD L++L+ KE++L E N+ L+++ L +D A Q G Q + G + P Q FF L+ LQ+ + PA+ + T ++N + GW+ Sbjct: 124 ELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRK---LEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNPANATNSATTSQNVNGFFPGWM 257
BLAST of FC930333 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 45/137 (32.85%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 26 EELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGY------QPADPISVVTAGPSLNNYMQGW 418 +EL+ LE+QL+ SL Q R +TQ M++ + +L+ KE+ L E NK LK + + + + + T+ G + AQP D ++CEPTLQIGY + A+P S G NN++ GW Sbjct: 123 KELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSNCRSAIQDSWVHGTVV-------SGGRVLNAQPPPD-----IDCEPTLQIGYYQFVRPEAANPRSNGGGGDQNNNFVMGW 247 The following BLAST results are available for this feature:
BLAST of FC930333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930333 ID=FC930333; Name=FC930333; organism=Citrus clementina; type=EST; length=669bpback to top |