FC930334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 3 Query: 462 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFET 123
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 3 Query: 441 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 +KS R+R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T Sbjct: 61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDT 101
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 3 Query: 399 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 KS G + V T RK+ +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T Sbjct: 76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDT 129
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 3 Query: 462 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET 121
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 396 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNT 569 R + V V A +T ++K +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT Sbjct: 98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNT 153
BLAST of FC930334 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 411 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFN 566 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFD 215 The following BLAST results are available for this feature:
BLAST of FC930334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930334 ID=FC930334; Name=FC930334; organism=Citrus clementina; type=EST; length=626bpback to top |