FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATD--PPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S+  LN G K+P +GLGTW++      EAVK A+ +GYR+IDCA +Y NE EVG AL E  K   +KR+D+F+ S L+C+ +  + ++   + +L +L + YLDLYL+HWP    +GF    D  P   SG+       F++     W AME LVD GLV+AIGVSNF   QI+ +
Sbjct:    2 ASHLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWP----TGFKPGPDYFPLDASGNVIPSDTDFVD----TWTAMEQLVDEGLVKAIGVSNFNPLQIERI 170          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 77/173 (44.51%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKG--SLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       A+K ALS GYR+IDCA +YGNE E+GEAL E+     ++ RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+ R       K+ WKA+E LV  GLV+A+G+SNF   QI ++
Sbjct:    3 ASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTVRYD-STHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDV 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.974e-31
Identity = 76/173 (43.93%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  212 VLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATD--PPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            VL TGAK+P +GLGTW++      EAVK A+ +GYR+IDCAH+Y NE EVG AL    +   +KRED+F+ S L+C+ +  + ++   + +L +L + YLDLYL+HWP    +GF    D  P  + G+     + F++     W AME LVD GLV+AIGVSNF   Q++++
Sbjct:    5 VLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWP----TGFKPGKDFFPLDEDGNVIPSEKDFVD----TWTAMEELVDEGLVKAIGVSNFNHLQVEKI 169          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 76/168 (45.24%), Postives = 103/168 (61.31%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L+TG ++P +GLGTW++      +AV  AL  GYR+IDCA  Y NE EVGEAL E      SL+R+D+F+TS L+ + +  + +E   R SL +L +SYLDLYL+HWP   A G GD   P    G+ +       +  W AME LVD GL +AIG+SNF   QI ++
Sbjct:    7 LSTGQRMPTVGLGTWKSAPGQVKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWP--MAFGRGDELIPRHPDGTIQYDD-THYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDI 171          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 76/177 (42.94%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGS-LKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATD--PPSKSGS---ERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S+  LN G K+P +GLGTW++      EAVK A+ +GYR+IDCA +Y NE EVG AL E  K   +KR+D+F+ S L+C+ +  + ++   + +L +L + YLDLYL+HWP    +GF    D  P   SG+       F++     W AME LVD GLV+ IGVSNF   QI+ +
Sbjct:    2 ASHLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDKSMVKGAFQKTLSDLQLDYLDLYLIHWP----TGFKPGPDYFPLDASGNVIPSDTDFVD----TWTAMEQLVDEGLVKTIGVSNFNPLQIERI 170          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.500e-31
Identity = 77/175 (44.00%), Postives = 112/175 (64.00%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSE---RRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +++  L+T AK+P +GLGTW++      EAVK A+  GYR+IDCA++Y NE EVGEA+ E   + ++KRED+F+ S L+ +      +      +LK+L +SYLD+YL+HWP+   S  GD   P    G+    +  FL+    AW+AME LVD GLV+A+GVSNF   QI++L
Sbjct:    2 ATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKS--GDDLFPKDDKGNAIGGKATFLD----AWEAMEELVDEGLVKALGVSNFSHFQIEKL 170          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30
Identity = 78/173 (45.09%), Postives = 109/173 (63.01%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       AVK ALSVGYR+IDCA +YGNE E+GEAL E      ++ RE++F+TS L+ + +    +E  ++ +L +L + YLDLYLMHWP   A   GD   P +  G+         K+ WKA+E LV  GLVRA+G+SNF   QI ++
Sbjct:    3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTICYD-STHYKETWKALEALVAKGLVRALGLSNFNSRQIDDI 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30
Identity = 78/173 (45.09%), Postives = 109/173 (63.01%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            +S  +L+TG K+P IGLGTW++       AVK ALSVGYR+IDCA +YGNE E+GEAL E      ++ RE++F+TS L+ + +    +E  +R +L +L + YLDLYLMHWP   A   GD   P +  G+         K+ WKA+E LV  GLV+A+G+SNF   QI ++
Sbjct:    3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP--YAFERGDNPFPKNADGTICYD-STHYKETWKALEALVAKGLVQALGLSNFNSRQIDDI 172          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30
Identity = 73/170 (42.94%), Postives = 111/170 (65.29%), Query Frame = 2
Query:  209 FVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF--KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            F L++G KIP +G GTW+    L  +AV+ AL  GYR+IDCA +Y NE EVGEA  + F  + ++KREDVF+TS L+ + +    +   +  +L +LG+ YLDLYL+HWP      F   ++    SGS  ++F++ +++ W+ ME LVD+GLV++IG+SNF V  + E+
Sbjct:    5 FKLSSGHKIPLVGFGTWKAETTLVGKAVEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWP----VAFEYTSNDIQTSGS-TQEFVS-IRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEV 168          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.182e-30
Identity = 78/174 (44.83%), Postives = 109/174 (62.64%), Query Frame = 2
Query:  200 SSYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF---KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            + + VL+TG K+P +GLGTW++   L  +AV  AL  GYR+IDCA +Y NE E+GEA  E     KG ++REDVF+TS L+ + +  + +E  +  +LK+L + YLDLYL+HWP   A   GD   P  + G+     ++  K  W AME LV  GLVRAIG+SNF   QI ++
Sbjct:    2 NDFAVLSTGRKMPLLGLGTWKSEPGLVKQAVIWALESGYRHIDCAPIYANEPEIGEAFQETMGPDKG-IRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIHWP--YAFQRGDTPFPRKEDGTLLYDDID-YKLTWAAMEKLVGKGLVRAIGLSNFNSRQIDDI 171          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ALDR_RAT1.511e-3143.50Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
AK1A1_MOUSE1.511e-3144.51Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
ALDR_BOVIN1.974e-3143.93Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]
A1A1A_DANRE3.367e-3145.24Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
ALDR_MOUSE4.397e-3142.94Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
AK1BA_HUMAN7.500e-3144.00Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
AK1A1_PONAB1.279e-3045.09Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_HUMAN1.279e-3045.09Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
ALRA_DICDI1.671e-3042.94Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
A1A1B_DANRE2.182e-3044.83Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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