FC930385

Overview
NameFC930385
Unique NameFC930385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNR---LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN+G ++P +G G W+       + +  A+  GYR  D A  YGNE EVGE ++ A K G +KRE++F+TS L+ + +    +E  +  +L +L + Y+DL+L+H+P        +   PP     +   F      L   WKA+E LV++G +++IG+SNF  + I +L
Sbjct:   12 LNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDL 181          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 63/168 (37.50%), Postives = 97/168 (57.74%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            LN G  +P +G G++   +      VE  K A+  G+R+ID A+LY NE +VG A+  +   GS+KRED+F TS L+C+      ++  +  SLK L + Y+DLYL+H+P   A   G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LNDGHFMPVLGFGSYAPPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFP--MALKPGETPLPKDENGKVMFDTVD-LCAIWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 60/164 (36.59%), Postives = 94/164 (57.32%), Query Frame = 2
Query:  203 SYFVLNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWP-ECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNF 688
            S   L++G ++P IGLG W+   +   E +  A+ +GYR+ DCA  Y +E +VGEAL EAFK G +KRE++F+T+ ++ S +    +    + SL+ L + YLDLYL+H+P     +  G       +           L++ W+ ME  V  GLVR+IG+SN+
Sbjct:    2 STVTLSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDH--GHVVEACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLGLVRSIGLSNY 163          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 61/170 (35.88%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN G  IP +G GT+   +      +E  K A+  G+R+ID AHLY NE +VG+A+  +   G++KRED+F TS L+ +      +   +  SL NL + Y+DLY++H+P   A   G+   P  ++G      ++ L + W+A+E   D+GL ++IGVSNF   Q++++
Sbjct:   10 LNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFP--VALKPGETLFPTDENGKPIFDSVD-LCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKI 176          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 62/162 (38.27%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNF 688
            LN G  +P +G GT+   +      +EAVK A+  G+ +ID AH+Y NE +VG A+  +   GS+KRED+F TS L+ + +    +   +  SLKNL + Y+DLYL+H+P       G+   P  ++G      ++ L   W+AME   D+GL ++IGVSNF
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKP--GEEVIPKDENGKILFDTVD-LCATWEAMEKCKDAGLAKSIGVSNF 168          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPS-KSGSERRQFLNR--LKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            LN+G +IP +G G W+   ++  + +  A+  GYR  D A  Y NE EVGE +  A K G +KRE++F+TS L+ S +    +E  +  +L +L + Y+DL+ +H+P        +   PP    G   +  +    L   W+A+E LVD GL ++IG+SNF    I +L
Sbjct:   12 LNSGYEIPLVGFGCWKLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDL 181          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 2
Query:  200 SSYFVLN-TGAKIPAIGLGTWQTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAF-KGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPS--KSGSERRQF-LNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            + Y  LN TG K+P  G G W+   + C E V  A+  GYR  D A  YGNE+EVG  +++A  +G +KRED+F+ + L+ + +S   +       LK+ G+ Y DLYL+H+P            PP      ++  QF  + + + W  +E +VD+GL R IGV+NF    I +L
Sbjct:    3 TDYLTLNRTGDKMPIRGFGCWKIDTKDCEETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLVKREDLFIVTKLWNTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAGLARNIGVANFNCQAILDL 178          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: PE2R_RABIT (Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuniculus GN=AKR1C5 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21
Identity = 62/168 (36.90%), Postives = 97/168 (57.74%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTW---QTGGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEAL-DEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIK 706
            L+ G  IP +G GT+   +      +EA K A+  G+R+ID A+ Y NE EVG A+  +   G++KRED+F TS L+C+ +    +   +  SLKNL + Y+DLY++H+P  +A   G    P  + G      ++ +   W+AME   D+GL ++IGVSNF   Q++
Sbjct:   10 LSDGHFIPVLGFGTYAPEEVPKSKAMEATKIAIDAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVKREDIFYTSKLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIHFP--TALKPGVEIIPTDEHGKAIFDTVD-ICATWEAMEKCKDAGLAKSIGVSNFNRRQLE 174          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21
Identity = 64/167 (38.32%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  215 LNTGAKIPAIGLGTWQT-GGELCVEAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFKGSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLKKAWKAMEGLVDSGLVRAIGVSNFGVSQIKEL 712
            L+ G K+P  GLG WQ+  GE+   AV  AL  GYR+ID A +Y NE  VG  L  +    + REDVF+T+ L+ +             S + LGV Y+DLYL+HWP           D  SK G   +++L+    +W+A E L     VRAIGVSNF +  ++++
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRAS---GVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPR--------GKDILSKEG---KKYLD----SWRAFEQLYKEKKVRAIGVSNFHIHHLEDV 159          
BLAST of FC930385 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21
Identity = 69/185 (37.30%), Postives = 101/185 (54.59%), Query Frame = 2
Query:  206 YFVLNTGAKIPAIGLGTWQTGGELCV--EAVKTALSVGYRNIDCAHLYGNEIEVGEALDEAFK-GSLKREDVFLTSTLYCSMNSINKIENYVRVSLKNLGVSYLDLYLMHWPECSASGFGDATDPPSKSGSERRQFLNRLK----------KAWKAMEGLV---DSGLVRAIGVSNFGVSQIKEL 712
            YF LN G +IPA+GLGT     +L    +AVK A+  GYR+ID A  Y  E  VGEA+ E  + GS+KRED+F+T+ ++  +   ++++  +  SLK LG+ Y+DL L HWP C    F    DP   SG  +    +  K          + +K +E +    +   VRAIGVSNF +  ++ L
Sbjct:   24 YFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVL--WDEVDRSLNESLKALGLEYVDLLLQHWPLC----FEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERL 202          
The following BLAST results are available for this feature:
BLAST of FC930385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
XYL1_CANTR8.312e-2234.12NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
AK1C4_MACFU1.418e-2137.50Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
S6PD_MALDO1.852e-2136.59NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
DDBX_BOVIN2.418e-2135.88Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
AK1C2_HUMAN2.418e-2138.27Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
XYL1_CANPA3.158e-2134.71NADH-dependent D-xylose reductase OS=Candida parap... [more]
DTDH_MUCMU3.158e-2135.804-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
PE2R_RABIT4.125e-2136.90Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuni... [more]
P100_LEIMA7.036e-2138.32Probable reductase OS=Leishmania major GN=P100/11E... [more]
ARA1_YEAST7.036e-2137.30D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]

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Properties
Property NameValue
Genbank descriptionC34007A04EF PostHarvC1 Citrus clementina cDNA clone C34007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930385 ID=FC930385; Name=FC930385; organism=Citrus clementina; type=EST; length=713bp
GCTGCTGGAGTTCATTGAGTCAAGTTGACAAACACTTGGCCTGCACTTTT
TAATACTGTCAAAAGCTTTGAAGTGAAAAAAAAAATGCAAACTCTCGTCN
TGGGTTTTGTGATTTTTGGTTTGATTTGGTATCTGTGTTTTTGATCTTTT
TTTCTTTTTGTTCATTTGGGAAATGAAAGGGAGATTTGCTAGTCCAGGGA
GTAGTTACTTTGTGTTGAACACAGGAGCTAAAATTCCAGCCATTGGATTG
GGAACATGGCAAACTGGGGGAGAGCTTTGTGTTGAGGCTGTGAAAACAGC
ATTGTCAGTGGGTTACCGTAATATAGATTGTGCTCATCTTTATGGGAATG
AGATTGAAGTTGGGGAAGCACTTGATGAAGCTTTCAAAGGATCTCTCAAG
AGAGAGGATGTGTTCCTGACCTCAACTCTCTATTGTAGTATGAATTCAAT
CAATAAGATTGAAAATTACGTCAGAGTGTCTCTTAAGAATCTTGGAGTTT
CATATTTGGATCTCTATTTAATGCATTGGCCTGAGTGCTCTGCTTCTGGT
TTTGGGGATGCTACTGATCCTCCTTCTAAGTCCGGGAGTGAGCGTAGGCA
GTTTTTAAATCGCTTGAAGAAAGCATGGAAAGCCATGGAAGGTCTCGTGG
ACTCGGGATTGGTCAGAGCTATTGGTGTCAGTAATTTTGGGGTTTCACAG
ATCAAAGAGTTGC
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